Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
---|---|
Accession | NC_011369 |
Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209550545
Identifier: 209550545
GI number: 209550545
Start: 3029655
End: 3030461
Strand: Direct
Name: 209550545
Synonym: Rleg2_2969
Alternate gene names: NA
Gene position: 3029655-3030461 (Clockwise)
Preceding gene: 209550544
Following gene: 209550546
Centisome position: 66.76
GC content: 55.27
Gene sequence:
>807_bases ATGCCACTTGTCACCTTCATCATCCCGGTTCGACATCAGGACAACGCGCGCGATTGGAACAAGCTGAAGGCGAATCTCAG CCAGACGATGACCTCCATATCCAATCAGACCAACGAAGATTGGCGCGGGATCATTGTCGCGAACGAAGGAGCCGATCTGC CGGACTTGCCGGAGAAGTTCTCTGCAGTGCGTGTGACTTTTCCGCCCAACGACATGCACGAACTCGGAAAGGGTGGCAAG GAAGCCTACCTTGATGCTTTCCGTGCCGACAAAGGCCGGCGTGTGCTGAGCGGCATGTTGCATTCCACTGACAGCCGCTT CTTCATGATTGTCGATGACGACGATTTCGTCAGTTCCCGGATCGTTCAACACGTAGCGGAAAACCGGGAGGCTAACGGAT GGACGATCGATCACGGCTACATCTGGGACAATGGCGGCAATTTCCTGTTTGAGCACGATGACTTCAGCCGTCTTTGCGGC ACCTCGCTGATCATTCGTGCCGATCTCTATGGACTGCCGCAGCGTTTTGACGATGCTTCGCTCGATTGGATCAAGTCGAT GCTGGGCAGCCATGTCCGAATTGCCAATATTCTTTCGCAACGCGGAACACCACTTGGGGCACTTCCATTCAGGGGCGCCG TCTATCGGGTCGCCCATGGCGGCTCGCACAGCCGAGCACCAAGTCTGATACGGCAGTATTTCCTGAATCGCGGTGTGCTT CTAAAGCCGAGACGGTTGTTGCGTAACTTCCGCAAGCTGAAGATGGTTGGGGGTGGCTATAAACGCGAATTTTTCGGCAA GGCGTGA
Upstream 100 bases:
>100_bases ACCTCACTCGAAGACGGAATTGACTGGGCACGTCATCAGGCGGCCAAGATGCGTGTCGATGAAAAAGAAGCTGTGAGCTT GCGGGCCTAGGGAGAATTCG
Downstream 100 bases:
>100_bases CACGAATCCGCATCAGCAATCGATCCGACCGAAAGCGTGGCTGCTGATGGAATACAACAGTGTTCGGAGCATCAAATGAG CAAAGTCAAGGTTACAATAC
Product: galactosyltransferase protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPLVTFIIPVRHQDNARDWNKLKANLSQTMTSISNQTNEDWRGIIVANEGADLPDLPEKFSAVRVTFPPNDMHELGKGGK EAYLDAFRADKGRRVLSGMLHSTDSRFFMIVDDDDFVSSRIVQHVAENREANGWTIDHGYIWDNGGNFLFEHDDFSRLCG TSLIIRADLYGLPQRFDDASLDWIKSMLGSHVRIANILSQRGTPLGALPFRGAVYRVAHGGSHSRAPSLIRQYFLNRGVL LKPRRLLRNFRKLKMVGGGYKREFFGKA
Sequences:
>Translated_268_residues MPLVTFIIPVRHQDNARDWNKLKANLSQTMTSISNQTNEDWRGIIVANEGADLPDLPEKFSAVRVTFPPNDMHELGKGGK EAYLDAFRADKGRRVLSGMLHSTDSRFFMIVDDDDFVSSRIVQHVAENREANGWTIDHGYIWDNGGNFLFEHDDFSRLCG TSLIIRADLYGLPQRFDDASLDWIKSMLGSHVRIANILSQRGTPLGALPFRGAVYRVAHGGSHSRAPSLIRQYFLNRGVL LKPRRLLRNFRKLKMVGGGYKREFFGKA >Mature_267_residues PLVTFIIPVRHQDNARDWNKLKANLSQTMTSISNQTNEDWRGIIVANEGADLPDLPEKFSAVRVTFPPNDMHELGKGGKE AYLDAFRADKGRRVLSGMLHSTDSRFFMIVDDDDFVSSRIVQHVAENREANGWTIDHGYIWDNGGNFLFEHDDFSRLCGT SLIIRADLYGLPQRFDDASLDWIKSMLGSHVRIANILSQRGTPLGALPFRGAVYRVAHGGSHSRAPSLIRQYFLNRGVLL KPRRLLRNFRKLKMVGGGYKREFFGKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30376; Mature: 30245
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVTFIIPVRHQDNARDWNKLKANLSQTMTSISNQTNEDWRGIIVANEGADLPDLPEKF CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHH SAVRVTFPPNDMHELGKGGKEAYLDAFRADKGRRVLSGMLHSTDSRFFMIVDDDDFVSSR CEEEEECCCCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHH IVQHVAENREANGWTIDHGYIWDNGGNFLFEHDDFSRLCGTSLIIRADLYGLPQRFDDAS HHHHHHHCCCCCCEEEECCEEEECCCCEEEECCCHHHHHCCCEEEEEHHHCCCCCCCCCH LDWIKSMLGSHVRIANILSQRGTPLGALPFRGAVYRVAHGGSHSRAPSLIRQYFLNRGVL HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEE LKPRRLLRNFRKLKMVGGGYKREFFGKA ECCHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure PLVTFIIPVRHQDNARDWNKLKANLSQTMTSISNQTNEDWRGIIVANEGADLPDLPEKF CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHH SAVRVTFPPNDMHELGKGGKEAYLDAFRADKGRRVLSGMLHSTDSRFFMIVDDDDFVSSR CEEEEECCCCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHH IVQHVAENREANGWTIDHGYIWDNGGNFLFEHDDFSRLCGTSLIIRADLYGLPQRFDDAS HHHHHHHCCCCCCEEEECCEEEECCCCEEEECCCHHHHHCCCEEEEEHHHCCCCCCCCCH LDWIKSMLGSHVRIANILSQRGTPLGALPFRGAVYRVAHGGSHSRAPSLIRQYFLNRGVL HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEE LKPRRLLRNFRKLKMVGGGYKREFFGKA ECCHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA