Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is epsO [H]
Identifier: 209550544
GI number: 209550544
Start: 3028613
End: 3029644
Strand: Direct
Name: epsO [H]
Synonym: Rleg2_2968
Alternate gene names: 209550544
Gene position: 3028613-3029644 (Clockwise)
Preceding gene: 209550543
Following gene: 209550545
Centisome position: 66.74
GC content: 54.65
Gene sequence:
>1032_bases ATGACCAGCCAATCCAGATCGGAACTGATTTCGAAACTCAATGGCATGATCCACGATTGCCTGAGGGATTACGTGTCACC TGAGGAACCGCTCGCAATTCTCGACTTCCCCGACATCCGCAATTGCGGGGACTCGGCAATCTGGTTGGGCGAAATGGCGT ATCTCAAGGATCGTTTCGGCAAACGTCCGGACTATGTCTCGAGAATACACGATTTCTCTGCTGATGAACTTAACCAACGC GTTCCAACAGGTCCGATTTTCATTCATGGTGGTGGCAATTTCGGCGATATCTGGGTTGCTCACCAGGATTTCCGTGAAGC GATCATGGAGCGTTTTCCGGATCGACAGATCATCCAGTTCCCGCAGTCGATCCACTACAGTTCGCCTGAGCGTATCGAGC AGTCCAAACGGGCAATCGGGCATCACAAGAATTTCGTTCTGCTCGTGCGGGACGAAGAGTCGAAGGAATTTTCCGAAAAA CACTTCGACTGCACCGTACGGTTATGCCCTGATATGGCCTTCGCCATCGGCGCCCTTCCGGACAGAGCAACTCAATTTTC GGTGCTCGCCATGTTGCGAGAAGATGCGGAACGGGTCGGGAGTTCCGATCGAAAAATCCCCTCAGATATACCGGTAGAGG ATTGGATATCGGAATCGAAACGGAAAGTGGAGATCGCCAAGAAGTTGGGGGCAGCGTCGGCGTTTCTCGCGTTGAAGCCA AGGGAATTGGCTCTGCGAACGTTGGACGCAGCGGCGCACAACCGCTTCGAGCGCGGCATCAGTCAGATTTCGCGCGCCCG CGCAATTGTCACCGATCGCCTGCACGTCCATATCTGCTCGCTGCTTCTCGGCCGCCCTCACGCGGTGCTGGACAACAGCT ACGGAAAGATCCGCCGCTTCATGAACGCTTTCTCCGGCGGAACGGATCTTTCATACAAGGCAACCTCACTCGAAGACGGA ATTGACTGGGCACGTCATCAGGCGGCCAAGATGCGTGTCGATGAAAAAGAAGCTGTGAGCTTGCGGGCCTAG
Upstream 100 bases:
>100_bases AAGTTCAGCGCATCGTCGTCAAGTTCCTGTCAAAAGCCAAGCGTATTGCCGTCGCAAAGTCGGCCTAAAAGCTACAACAA ATATCAACAAGAGAGGCAAA
Downstream 100 bases:
>100_bases GGAGAATTCGATGCCACTTGTCACCTTCATCATCCCGGTTCGACATCAGGACAACGCGCGCGATTGGAACAAGCTGAAGG CGAATCTCAGCCAGACGATG
Product: polysaccharide pyruvyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTSQSRSELISKLNGMIHDCLRDYVSPEEPLAILDFPDIRNCGDSAIWLGEMAYLKDRFGKRPDYVSRIHDFSADELNQR VPTGPIFIHGGGNFGDIWVAHQDFREAIMERFPDRQIIQFPQSIHYSSPERIEQSKRAIGHHKNFVLLVRDEESKEFSEK HFDCTVRLCPDMAFAIGALPDRATQFSVLAMLREDAERVGSSDRKIPSDIPVEDWISESKRKVEIAKKLGAASAFLALKP RELALRTLDAAAHNRFERGISQISRARAIVTDRLHVHICSLLLGRPHAVLDNSYGKIRRFMNAFSGGTDLSYKATSLEDG IDWARHQAAKMRVDEKEAVSLRA
Sequences:
>Translated_343_residues MTSQSRSELISKLNGMIHDCLRDYVSPEEPLAILDFPDIRNCGDSAIWLGEMAYLKDRFGKRPDYVSRIHDFSADELNQR VPTGPIFIHGGGNFGDIWVAHQDFREAIMERFPDRQIIQFPQSIHYSSPERIEQSKRAIGHHKNFVLLVRDEESKEFSEK HFDCTVRLCPDMAFAIGALPDRATQFSVLAMLREDAERVGSSDRKIPSDIPVEDWISESKRKVEIAKKLGAASAFLALKP RELALRTLDAAAHNRFERGISQISRARAIVTDRLHVHICSLLLGRPHAVLDNSYGKIRRFMNAFSGGTDLSYKATSLEDG IDWARHQAAKMRVDEKEAVSLRA >Mature_342_residues TSQSRSELISKLNGMIHDCLRDYVSPEEPLAILDFPDIRNCGDSAIWLGEMAYLKDRFGKRPDYVSRIHDFSADELNQRV PTGPIFIHGGGNFGDIWVAHQDFREAIMERFPDRQIIQFPQSIHYSSPERIEQSKRAIGHHKNFVLLVRDEESKEFSEKH FDCTVRLCPDMAFAIGALPDRATQFSVLAMLREDAERVGSSDRKIPSDIPVEDWISESKRKVEIAKKLGAASAFLALKPR ELALRTLDAAAHNRFERGISQISRARAIVTDRLHVHICSLLLGRPHAVLDNSYGKIRRFMNAFSGGTDLSYKATSLEDGI DWARHQAAKMRVDEKEAVSLRA
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG5039
COG function: function code GM; Exopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007345 [H]
Pfam domain/function: PF04230 PS_pyruv_trans [H]
EC number: NA
Molecular weight: Translated: 38887; Mature: 38755
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQSRSELISKLNGMIHDCLRDYVSPEEPLAILDFPDIRNCGDSAIWLGEMAYLKDRFG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC KRPDYVSRIHDFSADELNQRVPTGPIFIHGGGNFGDIWVAHQDFREAIMERFPDRQIIQF CCCHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCHHHHHC PQSIHYSSPERIEQSKRAIGHHKNFVLLVRDEESKEFSEKHFDCTVRLCPDMAFAIGALP HHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEECCHHHHHHHCCC DRATQFSVLAMLREDAERVGSSDRKIPSDIPVEDWISESKRKVEIAKKLGAASAFLALKP CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHEECH RELALRTLDAAAHNRFERGISQISRARAIVTDRLHVHICSLLLGRPHAVLDNSYGKIRRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHH MNAFSGGTDLSYKATSLEDGIDWARHQAAKMRVDEKEAVSLRA HHHHCCCCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure TSQSRSELISKLNGMIHDCLRDYVSPEEPLAILDFPDIRNCGDSAIWLGEMAYLKDRFG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC KRPDYVSRIHDFSADELNQRVPTGPIFIHGGGNFGDIWVAHQDFREAIMERFPDRQIIQF CCCHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCHHHHHC PQSIHYSSPERIEQSKRAIGHHKNFVLLVRDEESKEFSEKHFDCTVRLCPDMAFAIGALP HHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCEEEEECCHHHHHHHCCC DRATQFSVLAMLREDAERVGSSDRKIPSDIPVEDWISESKRKVEIAKKLGAASAFLALKP CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHEECH RELALRTLDAAAHNRFERGISQISRARAIVTDRLHVHICSLLLGRPHAVLDNSYGKIRRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHH MNAFSGGTDLSYKATSLEDGIDWARHQAAKMRVDEKEAVSLRA HHHHCCCCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]