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The map label for this gene is rbsB [H]

Identifier: 209550522

GI number: 209550522

Start: 3001953

End: 3002942

Strand: Direct

Name: rbsB [H]

Synonym: Rleg2_2945

Alternate gene names: 209550522

Gene position: 3001953-3002942 (Clockwise)

Preceding gene: 209550521

Following gene: 209550524

Centisome position: 66.15

GC content: 61.62

Gene sequence:

>990_bases
ATGAGGAAGGCATTATTGCTTACAGCTGCAGTTATGGCGCTGACGGCCGGTCAGGCGCTCGCCGCCAAGAAGCAGCTGGT
CATCGTCGTCAAAGGCCTCGACAACCCGTTCTTCGAGGCAATCAACCAGGGTTGCCAGAAGTGGAACAAGGAAAACGCAT
CCGCCGAATATGAATGCTTCTACACCGGCCCGGCATCGACCTCCGATGAGGCCGGCGAGGCGCAGATCGTCCAGGATATG
CTGGGGAAAGCCGATACCGCCGCCATCGCCATCTCGCCATCGAACGCCAAGCTGATCGCCCAGACGCTGAAGACGGCCAA
TCCGAGCGTTCCGGTGATGACGCTCGATGCCGATCTTGCGGCCGATGATGCGGCGCTGCGCAAAACCTATCTCGGCACCG
ACAACTATCTGATGGGCGCCAAGATCGGTGAATACATCAAGAAGGCCAAGCCGAAGGGCGGCAAGATCTGCACCATCGAA
GGCAATCCCGGCGCCGATAACATTCTGCGCCGCGCCCAGGGCATGCGCGATACGCTGAGCGGCCAGAAGGGGCTGGCGGC
GCTGAAAGGTGAAGGCGGCTGGACTGAGGTGGCCGGCTGCCCGGTCTTTACCAATGACGATGGCGCCAAGGGCGTGCAGG
CGATGACCGACATCCTCGCCGCCAACACCGACCTCGATGCCTTCGGCATCATGGGCGGCTGGCCGCTGTTCGGCGCCCCG
CAGCCCTATCGCGATCTGTTCAAGCCGATGGCCGACAAGATCGCCAAGAACGAGTTCGTCATCGGCGCCGCCGACACGAT
CGGCGACGAAGTGGCAATCGCCAAGGAAGGGCTGGTCACCGCGCTCGTCGGCCAGCGGCCGTTCGAAATGGGTTATAAGG
CGCCAACCGTGATGATGGACCTGATCGCCGGGAAGAAGGTCGAGGATCCGGTATTCACCGGGCTGGACGAATGCACCAAG
GATACCGTCGACACCTGCATTCAGAAGTGA

Upstream 100 bases:

>100_bases
GGACTATCAGCGCTCGAAGGAGGAGCCTCGGGTCGTCTGGTATCCAGGTTGATGACGCGGCGGGTGCAGAAGCGCCCGTC
TTTTTCAATGGGAGGAAGCT

Downstream 100 bases:

>100_bases
CCTCGGCATTCCAACAATGATGCGGCTCGGAGCGCCCACTCGCGTGGGCGCTCCGATGATCATACAGCGCTCGATTGCGC
ACCGATCCAGTCCGAAAATG

Product: sugar ABC transporter substrate-binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MRKALLLTAAVMALTAGQALAAKKQLVIVVKGLDNPFFEAINQGCQKWNKENASAEYECFYTGPASTSDEAGEAQIVQDM
LGKADTAAIAISPSNAKLIAQTLKTANPSVPVMTLDADLAADDAALRKTYLGTDNYLMGAKIGEYIKKAKPKGGKICTIE
GNPGADNILRRAQGMRDTLSGQKGLAALKGEGGWTEVAGCPVFTNDDGAKGVQAMTDILAANTDLDAFGIMGGWPLFGAP
QPYRDLFKPMADKIAKNEFVIGAADTIGDEVAIAKEGLVTALVGQRPFEMGYKAPTVMMDLIAGKKVEDPVFTGLDECTK
DTVDTCIQK

Sequences:

>Translated_329_residues
MRKALLLTAAVMALTAGQALAAKKQLVIVVKGLDNPFFEAINQGCQKWNKENASAEYECFYTGPASTSDEAGEAQIVQDM
LGKADTAAIAISPSNAKLIAQTLKTANPSVPVMTLDADLAADDAALRKTYLGTDNYLMGAKIGEYIKKAKPKGGKICTIE
GNPGADNILRRAQGMRDTLSGQKGLAALKGEGGWTEVAGCPVFTNDDGAKGVQAMTDILAANTDLDAFGIMGGWPLFGAP
QPYRDLFKPMADKIAKNEFVIGAADTIGDEVAIAKEGLVTALVGQRPFEMGYKAPTVMMDLIAGKKVEDPVFTGLDECTK
DTVDTCIQK
>Mature_329_residues
MRKALLLTAAVMALTAGQALAAKKQLVIVVKGLDNPFFEAINQGCQKWNKENASAEYECFYTGPASTSDEAGEAQIVQDM
LGKADTAAIAISPSNAKLIAQTLKTANPSVPVMTLDADLAADDAALRKTYLGTDNYLMGAKIGEYIKKAKPKGGKICTIE
GNPGADNILRRAQGMRDTLSGQKGLAALKGEGGWTEVAGCPVFTNDDGAKGVQAMTDILAANTDLDAFGIMGGWPLFGAP
QPYRDLFKPMADKIAKNEFVIGAADTIGDEVAIAKEGLVTALVGQRPFEMGYKAPTVMMDLIAGKKVEDPVFTGLDECTK
DTVDTCIQK

Specific function: Involved in the high-affinity D-ribose membrane transport system and also serves as the primary chemoreceptor for chemotaxis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790192, Length=310, Percent_Identity=25.4838709677419, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34720; Mature: 34720

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKALLLTAAVMALTAGQALAAKKQLVIVVKGLDNPFFEAINQGCQKWNKENASAEYECF
CCHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEE
YTGPASTSDEAGEAQIVQDMLGKADTAAIAISPSNAKLIAQTLKTANPSVPVMTLDADLA
ECCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCC
ADDAALRKTYLGTDNYLMGAKIGEYIKKAKPKGGKICTIEGNPGADNILRRAQGMRDTLS
CCHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCHHHHHC
GQKGLAALKGEGGWTEVAGCPVFTNDDGAKGVQAMTDILAANTDLDAFGIMGGWPLFGAP
CCCCCEEEECCCCCEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCC
QPYRDLFKPMADKIAKNEFVIGAADTIGDEVAIAKEGLVTALVGQRPFEMGYKAPTVMMD
CHHHHHHHHHHHHHHCCCEEEECHHHCCCCHHHHHCCHHHHHHCCCCHHCCCCCHHHHHH
LIAGKKVEDPVFTGLDECTKDTVDTCIQK
HHCCCCCCCHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKALLLTAAVMALTAGQALAAKKQLVIVVKGLDNPFFEAINQGCQKWNKENASAEYECF
CCHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEE
YTGPASTSDEAGEAQIVQDMLGKADTAAIAISPSNAKLIAQTLKTANPSVPVMTLDADLA
ECCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCC
ADDAALRKTYLGTDNYLMGAKIGEYIKKAKPKGGKICTIEGNPGADNILRRAQGMRDTLS
CCHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCHHHHHC
GQKGLAALKGEGGWTEVAGCPVFTNDDGAKGVQAMTDILAANTDLDAFGIMGGWPLFGAP
CCCCCEEEECCCCCEEECCCEEEECCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCC
QPYRDLFKPMADKIAKNEFVIGAADTIGDEVAIAKEGLVTALVGQRPFEMGYKAPTVMMD
CHHHHHHHHHHHHHHCCCEEEECHHHCCCCHHHHHCCHHHHHHCCCCHHCCCCCHHHHHH
LIAGKKVEDPVFTGLDECTKDTVDTCIQK
HHCCCCCCCHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6313683; 7686882; 9278503; 3011793; 3011794; 8899705; 9298646; 1583688; 7982928; 9641984 [H]