Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
---|---|
Accession | NC_011369 |
Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is yqiJ [C]
Identifier: 209550458
GI number: 209550458
Start: 2932140
End: 2932787
Strand: Direct
Name: yqiJ [C]
Synonym: Rleg2_2881
Alternate gene names: 209550458
Gene position: 2932140-2932787 (Clockwise)
Preceding gene: 209550457
Following gene: 209550459
Centisome position: 64.61
GC content: 61.57
Gene sequence:
>648_bases ATGGCACTGTTCTTCGCCCCCGAATGTGCTCCCTTTGCCATCGCCGCCGCCGTGCTTGCGGGCCTGACGGCGATCGAAAT GCTGGCCACCGTCATGGGTTTTTCGATCACCGAACTTCTCGGAAAACCGGATTTCCATGGCCATGACGGCATTGCCGGCT ATCTCTCCTGGCTCAATCTCGGCGGCGTTCCCCTGCTCATTCTGCTGATGCTGACACTCGGCTTCTTCGCCATTTCAGGC TTTGCCGTCCAGGCCGTCGCCAACGCCTTCTGGGCGCCGCTGCCCTCTGTCATCGCCGTCATTCCAGCTCTCTTGATCAC CTTCCCCATGGTCAGGGCATCGAGCAGAACCGTGGCGCGGATCGTGCCGCACGACGAGACCTATGCAGTCGATCTCGACG CCCTCGTCGGCCGGACCGCCGAAGTGTCCCTCGGCCCGCTCGATCAGGGACTGCCGGGACGCGTTCGCGTCAAGGACCAG CATGGAAACTGGCATGTGCTGAGAGCCAGGGCCGCCAAGGATCAGCAGCCTCTCGGGATCGGCACGCAGGTTCTCCTCGT CGATCGCAATGCAGATGTGTTTATCGCCATTCCCGCCCTGGTGGATCCCACCGGATCGGACAATCAATCTTTCACGGAGC AGTCATGA
Upstream 100 bases:
>100_bases ACACCCATAGTTCCGAATTGGACGAGCTTGACCGGTTGCACCGCGAGCGGGCGATCGAGGCACGTCTCGCACGCTTCAAG ACCGATAACCGGTAACGCCG
Downstream 100 bases:
>100_bases TGTATGACATTCTTCTACCGGCCGGCATTGCAATCGTTCTGATCTTCGGCATCGGTTTTGTCCTCGCCTCCCTGTACACA CGCTCCAGCCGTGACGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MALFFAPECAPFAIAAAVLAGLTAIEMLATVMGFSITELLGKPDFHGHDGIAGYLSWLNLGGVPLLILLMLTLGFFAISG FAVQAVANAFWAPLPSVIAVIPALLITFPMVRASSRTVARIVPHDETYAVDLDALVGRTAEVSLGPLDQGLPGRVRVKDQ HGNWHVLRARAAKDQQPLGIGTQVLLVDRNADVFIAIPALVDPTGSDNQSFTEQS
Sequences:
>Translated_215_residues MALFFAPECAPFAIAAAVLAGLTAIEMLATVMGFSITELLGKPDFHGHDGIAGYLSWLNLGGVPLLILLMLTLGFFAISG FAVQAVANAFWAPLPSVIAVIPALLITFPMVRASSRTVARIVPHDETYAVDLDALVGRTAEVSLGPLDQGLPGRVRVKDQ HGNWHVLRARAAKDQQPLGIGTQVLLVDRNADVFIAIPALVDPTGSDNQSFTEQS >Mature_214_residues ALFFAPECAPFAIAAAVLAGLTAIEMLATVMGFSITELLGKPDFHGHDGIAGYLSWLNLGGVPLLILLMLTLGFFAISGF AVQAVANAFWAPLPSVIAVIPALLITFPMVRASSRTVARIVPHDETYAVDLDALVGRTAEVSLGPLDQGLPGRVRVKDQH GNWHVLRARAAKDQQPLGIGTQVLLVDRNADVFIAIPALVDPTGSDNQSFTEQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789429, Length=183, Percent_Identity=27.8688524590164, Blast_Score=64, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22780; Mature: 22649
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFFAPECAPFAIAAAVLAGLTAIEMLATVMGFSITELLGKPDFHGHDGIAGYLSWLNL CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC GGVPLLILLMLTLGFFAISGFAVQAVANAFWAPLPSVIAVIPALLITFPMVRASSRTVAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEE IVPHDETYAVDLDALVGRTAEVSLGPLDQGLPGRVRVKDQHGNWHVLRARAAKDQQPLGI ECCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCC GTQVLLVDRNADVFIAIPALVDPTGSDNQSFTEQS CCEEEEEECCCCEEEEECCEECCCCCCCCCCCCCC >Mature Secondary Structure ALFFAPECAPFAIAAAVLAGLTAIEMLATVMGFSITELLGKPDFHGHDGIAGYLSWLNL CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC GGVPLLILLMLTLGFFAISGFAVQAVANAFWAPLPSVIAVIPALLITFPMVRASSRTVAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEE IVPHDETYAVDLDALVGRTAEVSLGPLDQGLPGRVRVKDQHGNWHVLRARAAKDQQPLGI ECCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCC GTQVLLVDRNADVFIAIPALVDPTGSDNQSFTEQS CCEEEEEECCCCEEEEECCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA