Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is 209550457

Identifier: 209550457

GI number: 209550457

Start: 2930995

End: 2932134

Strand: Direct

Name: 209550457

Synonym: Rleg2_2880

Alternate gene names: NA

Gene position: 2930995-2932134 (Clockwise)

Preceding gene: 209550456

Following gene: 209550458

Centisome position: 64.59

GC content: 62.81

Gene sequence:

>1140_bases
ATGGCACCCACGAGCAAGACATCGCATCCGTCACTATTGCGCTACATGCTTGCGCCTGACGATCAGGCCCGACAGGCGCT
TGATGACACCATTGCCGCCTATCGCAGGATGACCGACATCCTGAGCGAACTCATCGACGAAAAGGCCGGCGCCAATCTCG
TGGTCCTGCATGATCTTGCTTACGAAACCGTCCGCGAGCAGACGGGCCTGCCGGCGCGGCTGGTCACACTCGGCCTTCGT
GATTTCGCCGCCAATCGGGGCGTCATCCCCGATCCGCTGCAACTGCCGCTCGACGATAAGCTCTTCGCCATCAAGGGCCC
CTCGGATCTCACGATCGCCACGGTGCACGGACGTGTTGCCGTGCCTTTCGATGTCGCGGGCTATTCCAAGGGATGGGAGA
GTATTTTTCCCGCATACCTTGTAGCGGACCACGATCGCTACGAGATTAACATCGGCGTCACGCCGCATTCCACTCGGATG
GAGGAAAACATGACGAATGAAGGCATTCTTTCACGCATGGGTCGCCTGATCGCGGGCATCGCGAATGCAGCGATCGACAA
AGCGGAAGGCGTCAACAAGATCGCCGTCATCGAACAGGCTATCCGCGAGATCGATGCGGCCGCCGAGGAAGCCCGCACCG
ACCTCGGCAAGGCGCGGGCTGAGGAATACCGCATCCAGAGCCGCAAGGACGAAATCGTCGAAGACATGGACGCGCTCGAC
GCGAAGATCCGCCTTGCCGTCTCCTCTGGACGGGATGATCTTGCAAAAGCCGGCGTCGCCCGTCAGATCGATCTCGAATC
CCAGATCGCAGCGCTCGACAAGGCGCTGGCCGATGCCCGGGAGCAGTTGGACGAAGGCCAGAAAGCCCTGCAGGCCGTGC
TCGCCACCCGCCGCGAGGCCGACGCCCGCCTTGCCGATTTCAAGCGCAGCATCGCCAAGCATCCCGAAGAAGCCGCAGCC
GGCCATAACAGACCGACGCCAGGCGCAGGTGCCGCCCGCGCCGCCGCGGCAGTCTCGCGGCTGACCGGCGTTCCCGCGGG
CGAGCACACCCATAGTTCCGAATTGGACGAGCTTGACCGGTTGCACCGCGAGCGGGCGATCGAGGCACGTCTCGCACGCT
TCAAGACCGATAACCGGTAA

Upstream 100 bases:

>100_bases
ATCGCTCTACGCCTCCCTCCGTCTAACGATACGTTAAACAAAGGTTGTATTTTTTGCGCCTCATCTTGAAAGCACAAAAG
CGGTGCTTTATGTTTTATCC

Downstream 100 bases:

>100_bases
CGCCGATGGCACTGTTCTTCGCCCCCGAATGTGCTCCCTTTGCCATCGCCGCCGCCGTGCTTGCGGGCCTGACGGCGATC
GAAATGCTGGCCACCGTCAT

Product: phage shock protein A, PspA

Products: NA

Alternate protein names: PspA/IM30 Family Protein; Phage-Related Protein

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MAPTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLAYETVREQTGLPARLVTLGLR
DFAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVAVPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRM
EENMTNEGILSRMGRLIAGIANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALD
AKIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREADARLADFKRSIAKHPEEAAA
GHNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDRLHRERAIEARLARFKTDNR

Sequences:

>Translated_379_residues
MAPTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLAYETVREQTGLPARLVTLGLR
DFAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVAVPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRM
EENMTNEGILSRMGRLIAGIANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALD
AKIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREADARLADFKRSIAKHPEEAAA
GHNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDRLHRERAIEARLARFKTDNR
>Mature_378_residues
APTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLAYETVREQTGLPARLVTLGLRD
FAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVAVPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRME
ENMTNEGILSRMGRLIAGIANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALDA
KIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREADARLADFKRSIAKHPEEAAAG
HNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDRLHRERAIEARLARFKTDNR

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41292; Mature: 41161

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLA
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH
YETVREQTGLPARLVTLGLRDFAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVA
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEE
VPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRMEENMTNEGILSRMGRLIAGI
ECEECCCCCCCHHHHCCHHHEECCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHH
ANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREA
HHEEEEECCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARLADFKRSIAKHPEEAAAGHNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDR
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LHRERAIEARLARFKTDNR
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
APTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLA
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH
YETVREQTGLPARLVTLGLRDFAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVA
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEE
VPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRMEENMTNEGILSRMGRLIAGI
ECEECCCCCCCHHHHCCHHHEECCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHH
ANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREA
HHEEEEECCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARLADFKRSIAKHPEEAAAGHNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDR
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LHRERAIEARLARFKTDNR
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA