Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550428
Identifier: 209550428
GI number: 209550428
Start: 2899220
End: 2900209
Strand: Direct
Name: 209550428
Synonym: Rleg2_2849
Alternate gene names: NA
Gene position: 2899220-2900209 (Clockwise)
Preceding gene: 209550424
Following gene: 209550431
Centisome position: 63.89
GC content: 61.92
Gene sequence:
>990_bases ATGTCTCGTCCCCTCCTCTCCGCCTGTCTGGCTGTCTCCTTCCTTCTGCCTGTCACGGCAGAGGCGGTCGACCGGCCGAA ACAGCTGGTCATCATCTCCTTCGACGGCGCCCACGACAATGCGCTCTGGCTGAAAAGCCGCGAGATGGCCGTAAAGAACG GCGCCCATTTCACCTATTTCCTCTCCTGCACCTTCCTGATGAACGAGGCGGCGAAGAAGGCCTACCAGGCGCCGCACCAG AGACGCGGAAAATCCAATGTCGGCTTCGCCCAGAGCGACGACGAGATCCGCGAACGCCTCGGCAATATTTGGCACGCCCA TCTCGAAGGTCACGACATATCGAGCCACGCCTGCGGCCATTTCGATGGCCGCGAGTGGAGCGAGGCCGATTGGTCGGCCG AATACGCCACCTTCCACACCACCCTGAAGAATGCTTGGAAAGGCGTCGGTCTGGACGAGCCGGCCGGCTGGCAGGATCTC GTCGATCACGGCATCAAGGGTTTCCGCGCCCCCTACCTCTCCGCGACCGCGGGAGCCGACATGATTGCCGCCGAAAAGAA GGCGGGCTTCAGCTATGACGCGAGCCTCGTCACCAAAGGCCCGGCCATGCCTGTCGAGGAAGACGGCATCATCCGCTTCG GCCTGCCGCTGATCCCCGAAGGCCCAAGCGAAAAGCCGATCATCGGCATGGACTACAATCTCTTCGTGCGCCATTCGAAA GGCGAGGAAGACACCGCAGACAGTTCAGCCTTCGAGCAGCGCGCCTATTCAGCCTTCAAAGAGGCTTTTGACAAGCAATA TGCCGGAAGCCGAATCCCCCTCCAGCTCGGCTTCCACTTCGTCGAGATGAACGGCGGCGCCTACTGGCGCGCCCTCGACC GTCTGGTCAGCGACGTCTGCCATCGAGCCGACGTCGCCTGCGTCAGCTATTCGGAAGCGATCCCGATGATCGAGGCGCGC GGAAGATTGCAGCAGACGTCGGGGCTATGA
Upstream 100 bases:
>100_bases TGTCATGGCTTAGCGGCTGGCGGGAAAAAATACCAGTTGAGACCGCAGCTTCGCCGCAATTCTATCGGAGGGAAACCGCG AACAAATTGTCGCGGTGCCC
Downstream 100 bases:
>100_bases CGGGATAGTTTTTAAAGCGAAACGTCGAACCGAGCGGCCCCCTCATCCGGCTACCGCCACCTCTCCCCGCTGGGGAGAAG AGACAAGCAGCGGCGTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Polysaccharide Deacetylase; Lipoprotein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYFLSCTFLMNEAAKKAYQAPHQ RRGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGHFDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDL VDHGIKGFRAPYLSATAGADMIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSK GEEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVCHRADVACVSYSEAIPMIEAR GRLQQTSGL
Sequences:
>Translated_329_residues MSRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYFLSCTFLMNEAAKKAYQAPHQ RRGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGHFDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDL VDHGIKGFRAPYLSATAGADMIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSK GEEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVCHRADVACVSYSEAIPMIEAR GRLQQTSGL >Mature_328_residues SRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYFLSCTFLMNEAAKKAYQAPHQR RGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGHFDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDLV DHGIKGFRAPYLSATAGADMIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSKG EEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVCHRADVACVSYSEAIPMIEARG RLQQTSGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36345; Mature: 36214
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYF CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHHHCCCCEEEE LSCTFLMNEAAKKAYQAPHQRRGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGH EHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCC FDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDLVDHGIKGFRAPYLSATAGAD CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCH MIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSK HHHHHHHCCCCCCCHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECC GEEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVC CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEEEECCCHHHHHHHHHHHHHH HRADVACVSYSEAIPMIEARGRLQQTSGL HHCCHHEEEHHHCCCHHHHCCCHHHCCCC >Mature Secondary Structure SRPLLSACLAVSFLLPVTAEAVDRPKQLVIISFDGAHDNALWLKSREMAVKNGAHFTYF CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHHHCCCCEEEE LSCTFLMNEAAKKAYQAPHQRRGKSNVGFAQSDDEIRERLGNIWHAHLEGHDISSHACGH EHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCC FDGREWSEADWSAEYATFHTTLKNAWKGVGLDEPAGWQDLVDHGIKGFRAPYLSATAGAD CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCH MIAAEKKAGFSYDASLVTKGPAMPVEEDGIIRFGLPLIPEGPSEKPIIGMDYNLFVRHSK HHHHHHHCCCCCCCHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECC GEEDTADSSAFEQRAYSAFKEAFDKQYAGSRIPLQLGFHFVEMNGGAYWRALDRLVSDVC CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECEEEEEECCCHHHHHHHHHHHHHH HRADVACVSYSEAIPMIEARGRLQQTSGL HHCCHHEEEHHHCCCHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA