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The map label for this gene is ohrR [H]

Identifier: 209550424

GI number: 209550424

Start: 2895618

End: 2896055

Strand: Direct

Name: ohrR [H]

Synonym: Rleg2_2845

Alternate gene names: 209550424

Gene position: 2895618-2896055 (Clockwise)

Preceding gene: 209550422

Following gene: 209550428

Centisome position: 63.81

GC content: 59.82

Gene sequence:

>438_bases
ATGCAGGATCAGCTGAAAGTCGACAATTTCATCTGCTTTGCCGTCTATACGGCAAGCCACGCGCTGAACCGCGTCTACAA
GCCGCTTCTCGATAAACTCGGCCTCACCTATCCGCAATATCTGGCCATGGTCGCGTTATGGGAGCGGGACGGCCAGAGCG
TCGGCAGCCTCGGCGAAAGGCTCTTCCTGGAATCGAGCACGTTGACACCATTACTGAAACGCCTGGAAAGCGCCGGCTAT
ATCAGGCGCGAACGCAGCAGCGAGGACGAACGCGTCGTCGTCATTCGGCTCAGCGAGGCGGGTATTCGCCTGAAGGAAAA
TGCGATCGGCATCCCGGGCTGCATCGTCGAAGCGAGCGGCCGCGAAGCGGTGGATCTCACCCGGCTACAGGCTGAGATCG
TGGCGCTACGCGAAGCGCTGAATAAGAGCGCGGCTTAG

Upstream 100 bases:

>100_bases
ATTTATTGGACAACTTAAATCTCCGCATGCCTGCCATGCAGAAAAATCGCTTGCGATTATTTATCGCGCGATATAACGTT
GCCCGATTCTGGAGATGACC

Downstream 100 bases:

>100_bases
GTTCAAGACGACCGAGATAGCACGCACCTGAGGCGCCCCCTCTGCCCTGCCGGGCATCTCCCCCACAGGTGGGGAGATCG
GCTGGGCGGACCCGCTCGCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQDQLKVDNFICFAVYTASHALNRVYKPLLDKLGLTYPQYLAMVALWERDGQSVGSLGERLFLESSTLTPLLKRLESAGY
IRRERSSEDERVVVIRLSEAGIRLKENAIGIPGCIVEASGREAVDLTRLQAEIVALREALNKSAA

Sequences:

>Translated_145_residues
MQDQLKVDNFICFAVYTASHALNRVYKPLLDKLGLTYPQYLAMVALWERDGQSVGSLGERLFLESSTLTPLLKRLESAGY
IRRERSSEDERVVVIRLSEAGIRLKENAIGIPGCIVEASGREAVDLTRLQAEIVALREALNKSAA
>Mature_145_residues
MQDQLKVDNFICFAVYTASHALNRVYKPLLDKLGLTYPQYLAMVALWERDGQSVGSLGERLFLESSTLTPLLKRLESAGY
IRRERSSEDERVVVIRLSEAGIRLKENAIGIPGCIVEASGREAVDLTRLQAEIVALREALNKSAA

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16137; Mature: 16137

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDQLKVDNFICFAVYTASHALNRVYKPLLDKLGLTYPQYLAMVALWERDGQSVGSLGER
CCCCCCHHHEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
LFLESSTLTPLLKRLESAGYIRRERSSEDERVVVIRLSEAGIRLKENAIGIPGCIVEASG
HHHCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEECCC
REAVDLTRLQAEIVALREALNKSAA
CCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDQLKVDNFICFAVYTASHALNRVYKPLLDKLGLTYPQYLAMVALWERDGQSVGSLGER
CCCCCCHHHEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
LFLESSTLTPLLKRLESAGYIRRERSSEDERVVVIRLSEAGIRLKENAIGIPGCIVEASG
HHHCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEECCC
REAVDLTRLQAEIVALREALNKSAA
CCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]