Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is livJ [C]
Identifier: 209550409
GI number: 209550409
Start: 2878863
End: 2879966
Strand: Direct
Name: livJ [C]
Synonym: Rleg2_2830
Alternate gene names: 209550409
Gene position: 2878863-2879966 (Clockwise)
Preceding gene: 209550407
Following gene: 209550410
Centisome position: 63.44
GC content: 63.77
Gene sequence:
>1104_bases ATGACCCTCAAGACATTGACGGCGACACTCGTCGCGTCGCTTGCCTTCGCGCCGCTTGCCCATGCCGATATCACCATCGG CCTGATTGCGCCGCTGACCGGCCCCGTCGCCGCCTATGGCGACCAGGTGAAGAACGGCGCTCAGACCGCCGTCGACGAGA TCAACAAGAAGGGCGGCATTCTCGGCGAGAAGGTCGTCCTCGAGCTGGCCGACGATGCCGGCGAACCGAAGCAGGGCGTT TCCGCCGCCAACAAGGTCGTCGCCGACGGCATTCGCTTCGTCGTCGGCCCGGTGACCTCGGGTGTTGCCATTCCGGTTTC AGACGTGCTGGCTGAAAACGGTGTGCTGATGGTCACCCCGACTGCAACGGCCCCCGACCTCACCAAGCGCGGCCTCACCA ACGTGCTGCGCACCTGCGGCCGCGACGACCAGCAGGCCGAAGTCGCTGCCAAATACGTGCTGAAGAATTTCAAGGATAAG CGCGTCGCCATCGTCAACGACAAGGGCGCCTATGGCAAAGGCCTTGCCGACGCCTTCAAGGCGACGCTGAACGCCGGTGG CATGACCGAAGTCGTCAATGACGCGGTCACTCCAGGCGACAAGGATTTCAGCGCCCTCACCACCCGCGTCAAATCGGAAA AGGTCGACCTGGTCTATTTCGGCGGCTATCACCCGGAAGGCGGCCTGCTCGCCCGCCAGCTACATGACCTCGCCGCCAAC GCGACGATCATCGGCGGCGACGGCCTCTCCAACACCGAATTCTGGGCGATCGGCACGGATGCGGCGGCAGGCACCCTATT CACCAATGCCTCCGACGCCACCAAGAACCCGGATTCCAAGGCTGCCGCTGATGCGCTCGCTGCCAAGAACATCCCGGCCG AGGCCTTCACGCTCAACGCCTATGCCGCCGTCGAAGTGCTGAAAGCCGGCATCGAGAAGGCCGGCAGCGCCGAGGATGCG GAAGCCGTGGCGACCGCGCTGAAAGACGGCAAGGAAATCCCGACTGCTATCGGCAAGGTCACCTATGGCGAAACCGGTGA CCTGACCTCGCAGAGCTTCTCGCTCTACAAATGGGAAGGCGGCAAGATCGTCGCCGCCGAGTAA
Upstream 100 bases:
>100_bases TCGATCGTCCTTGGCACGGCCCAAAGGGCCGTGGAATGATCGCAAAAACCGGCGCGGCACCTCATCGCGGGTCGAAGGAC CCCACCCAAGGAGACAGACA
Downstream 100 bases:
>100_bases ACTATCGCTGATCGCCATCGACCGGGCGCCCCCGTGGCGCCCGGTTTCGTTTGCGGCACTCGCTTGTGGCGGCAGATCGG CTATAAGTTTGAGAATCGGT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTLKTLTATLVASLAFAPLAHADITIGLIAPLTGPVAAYGDQVKNGAQTAVDEINKKGGILGEKVVLELADDAGEPKQGV SAANKVVADGIRFVVGPVTSGVAIPVSDVLAENGVLMVTPTATAPDLTKRGLTNVLRTCGRDDQQAEVAAKYVLKNFKDK RVAIVNDKGAYGKGLADAFKATLNAGGMTEVVNDAVTPGDKDFSALTTRVKSEKVDLVYFGGYHPEGGLLARQLHDLAAN ATIIGGDGLSNTEFWAIGTDAAAGTLFTNASDATKNPDSKAAADALAAKNIPAEAFTLNAYAAVEVLKAGIEKAGSAEDA EAVATALKDGKEIPTAIGKVTYGETGDLTSQSFSLYKWEGGKIVAAE
Sequences:
>Translated_367_residues MTLKTLTATLVASLAFAPLAHADITIGLIAPLTGPVAAYGDQVKNGAQTAVDEINKKGGILGEKVVLELADDAGEPKQGV SAANKVVADGIRFVVGPVTSGVAIPVSDVLAENGVLMVTPTATAPDLTKRGLTNVLRTCGRDDQQAEVAAKYVLKNFKDK RVAIVNDKGAYGKGLADAFKATLNAGGMTEVVNDAVTPGDKDFSALTTRVKSEKVDLVYFGGYHPEGGLLARQLHDLAAN ATIIGGDGLSNTEFWAIGTDAAAGTLFTNASDATKNPDSKAAADALAAKNIPAEAFTLNAYAAVEVLKAGIEKAGSAEDA EAVATALKDGKEIPTAIGKVTYGETGDLTSQSFSLYKWEGGKIVAAE >Mature_366_residues TLKTLTATLVASLAFAPLAHADITIGLIAPLTGPVAAYGDQVKNGAQTAVDEINKKGGILGEKVVLELADDAGEPKQGVS AANKVVADGIRFVVGPVTSGVAIPVSDVLAENGVLMVTPTATAPDLTKRGLTNVLRTCGRDDQQAEVAAKYVLKNFKDKR VAIVNDKGAYGKGLADAFKATLNAGGMTEVVNDAVTPGDKDFSALTTRVKSEKVDLVYFGGYHPEGGLLARQLHDLAANA TIIGGDGLSNTEFWAIGTDAAAGTLFTNASDATKNPDSKAAADALAAKNIPAEAFTLNAYAAVEVLKAGIEKAGSAEDAE AVATALKDGKEIPTAIGKVTYGETGDLTSQSFSLYKWEGGKIVAAE
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=358, Percent_Identity=42.1787709497207, Blast_Score=271, Evalue=6e-74, Organism=Escherichia coli, GI1789867, Length=358, Percent_Identity=39.9441340782123, Blast_Score=263, Evalue=2e-71,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 37619; Mature: 37488
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKTLTATLVASLAFAPLAHADITIGLIAPLTGPVAAYGDQVKNGAQTAVDEINKKGGI CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC LGEKVVLELADDAGEPKQGVSAANKVVADGIRFVVGPVTSGVAIPVSDVLAENGVLMVTP CHHHHHEEECCCCCCCHHHHHHHHHHHHCCHHEEECCCCCCCEECHHHHHHCCCEEEEEC TATAPDLTKRGLTNVLRTCGRDDQQAEVAAKYVLKNFKDKRVAIVNDKGAYGKGLADAFK CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH ATLNAGGMTEVVNDAVTPGDKDFSALTTRVKSEKVDLVYFGGYHPEGGLLARQLHDLAAN HHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCC ATIIGGDGLSNTEFWAIGTDAAAGTLFTNASDATKNPDSKAAADALAAKNIPAEAFTLNA CEEEECCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHEEEHH YAAVEVLKAGIEKAGSAEDAEAVATALKDGKEIPTAIGKVTYGETGDLTSQSFSLYKWEG HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCEECCCCCCCCCCCCEEEEECC GKIVAAE CEEEECC >Mature Secondary Structure TLKTLTATLVASLAFAPLAHADITIGLIAPLTGPVAAYGDQVKNGAQTAVDEINKKGGI CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC LGEKVVLELADDAGEPKQGVSAANKVVADGIRFVVGPVTSGVAIPVSDVLAENGVLMVTP CHHHHHEEECCCCCCCHHHHHHHHHHHHCCHHEEECCCCCCCEECHHHHHHCCCEEEEEC TATAPDLTKRGLTNVLRTCGRDDQQAEVAAKYVLKNFKDKRVAIVNDKGAYGKGLADAFK CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHH ATLNAGGMTEVVNDAVTPGDKDFSALTTRVKSEKVDLVYFGGYHPEGGLLARQLHDLAAN HHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCC ATIIGGDGLSNTEFWAIGTDAAAGTLFTNASDATKNPDSKAAADALAAKNIPAEAFTLNA CEEEECCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHEEEHH YAAVEVLKAGIEKAGSAEDAEAVATALKDGKEIPTAIGKVTYGETGDLTSQSFSLYKWEG HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCEECCCCCCCCCCCCEEEEECC GKIVAAE CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]