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The map label for this gene is 209550402

Identifier: 209550402

GI number: 209550402

Start: 2871648

End: 2872604

Strand: Direct

Name: 209550402

Synonym: Rleg2_2823

Alternate gene names: NA

Gene position: 2871648-2872604 (Clockwise)

Preceding gene: 209550398

Following gene: 209550403

Centisome position: 63.28

GC content: 60.61

Gene sequence:

>957_bases
ATGAAAACAACAAGCACGTTCAAACTGGTTACTGCAACTGCCGTCGCCGCCCTCTCCGTCGCGACCGCCGCCTTCGCCGC
CGATCCCGACAGCTGCTCCACCGTCCACTTCTCGGATGTCGGCTGGACTGATATTACCGCCACCACCGCCACCGCATCCG
TCGTCTTGAAGAGCATCGGCTATCAGACCGACGTGAAGGTTCTCTCGGTGCCGGTCACCTACACCTCGCTGAAGAACAAG
GACATCGACATCTTCCTCGGCAACTGGATGCCGACGCAGGAAAAGGACGTCCGCCCTTATCTCGATGACAAGTCGGTCGA
ATCCTTCGGCCCCAACCTCGTCGGCGCCAAGTACACACTCGCCACCAACGCCAAGGGCGCCGAACTCGGCATCAAGGACT
TCAAGGACATCGCCGCCCACAAGGACGATCTCGACGGCAAGATCTACGGCATTGAGCCCGGCAATGACGGCAACCGCCTG
GTCATGGACCTGATCGAAAAGAACACCTTCGGCATGAAGGAGATGGAAGTCGTCGAATCCTCCGAACAGGGCATGCTCGC
TCAGGTCGCCCGTGCCGAGAAAGCAGGCAAGCCCGTCGTCTTCCTCGGCTGGGAGCCCCATCCGATGAACACCAACTTCA
AGCTGACCTACCTCACCGGCGGTGACGACGTCTTCGGTCCAGACTTCGGCGGTGCCAAGGTCTATACCAATGTCCGCGCC
GGCTATCTCGACGAATGCCCGAATGTCGGCGCGATGCTGAAGAACCTGAAGTTCTCCCTCGACATGGAGAATAAGATCAT
GGGCAAGATCCTCGACGACGGCAAGGAGCCGGAAGCTGCCGCTTCCGAATGGTTGAAGGCGAACCCTTCTGCGCTCGAGC
CCTGGCTCGCAGGGGTCAAGACCCGCGACGGCAAGGGCGACGCGCTGGCGGCCGCCAAGACCGGTCTCGGCCTTTGA

Upstream 100 bases:

>100_bases
TCGCAATCGCATGGGTCGATACGACGCAAACGCACTGAGGTCGCTTGTCAAACTCGGCTATTGGTGGTTGGCTTGGGAAC
TTAAAGACTGGGAGTCTAAA

Downstream 100 bases:

>100_bases
TGCTATGAACGGGGCGGCGAGCCGCCCCGTTTCATTTTGTCCATTGTTGATTTTTTCTGGATAGGCGCGCGCTCTTGAAT
TGGATCACCGACTTTAAGAT

Product: choline ABC transporter periplasmic binding protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKTTSTFKLVTATAVAALSVATAAFAADPDSCSTVHFSDVGWTDITATTATASVVLKSIGYQTDVKVLSVPVTYTSLKNK
DIDIFLGNWMPTQEKDVRPYLDDKSVESFGPNLVGAKYTLATNAKGAELGIKDFKDIAAHKDDLDGKIYGIEPGNDGNRL
VMDLIEKNTFGMKEMEVVESSEQGMLAQVARAEKAGKPVVFLGWEPHPMNTNFKLTYLTGGDDVFGPDFGGAKVYTNVRA
GYLDECPNVGAMLKNLKFSLDMENKIMGKILDDGKEPEAAASEWLKANPSALEPWLAGVKTRDGKGDALAAAKTGLGL

Sequences:

>Translated_318_residues
MKTTSTFKLVTATAVAALSVATAAFAADPDSCSTVHFSDVGWTDITATTATASVVLKSIGYQTDVKVLSVPVTYTSLKNK
DIDIFLGNWMPTQEKDVRPYLDDKSVESFGPNLVGAKYTLATNAKGAELGIKDFKDIAAHKDDLDGKIYGIEPGNDGNRL
VMDLIEKNTFGMKEMEVVESSEQGMLAQVARAEKAGKPVVFLGWEPHPMNTNFKLTYLTGGDDVFGPDFGGAKVYTNVRA
GYLDECPNVGAMLKNLKFSLDMENKIMGKILDDGKEPEAAASEWLKANPSALEPWLAGVKTRDGKGDALAAAKTGLGL
>Mature_318_residues
MKTTSTFKLVTATAVAALSVATAAFAADPDSCSTVHFSDVGWTDITATTATASVVLKSIGYQTDVKVLSVPVTYTSLKNK
DIDIFLGNWMPTQEKDVRPYLDDKSVESFGPNLVGAKYTLATNAKGAELGIKDFKDIAAHKDDLDGKIYGIEPGNDGNRL
VMDLIEKNTFGMKEMEVVESSEQGMLAQVARAEKAGKPVVFLGWEPHPMNTNFKLTYLTGGDDVFGPDFGGAKVYTNVRA
GYLDECPNVGAMLKNLKFSLDMENKIMGKILDDGKEPEAAASEWLKANPSALEPWLAGVKTRDGKGDALAAAKTGLGL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34060; Mature: 34060

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTSTFKLVTATAVAALSVATAAFAADPDSCSTVHFSDVGWTDITATTATASVVLKSIG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHCC
YQTDVKVLSVPVTYTSLKNKDIDIFLGNWMPTQEKDVRPYLDDKSVESFGPNLVGAKYTL
CCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEE
ATNAKGAELGIKDFKDIAAHKDDLDGKIYGIEPGNDGNRLVMDLIEKNTFGMKEMEVVES
EECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHC
SEQGMLAQVARAEKAGKPVVFLGWEPHPMNTNFKLTYLTGGDDVFGPDFGGAKVYTNVRA
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCC
GYLDECPNVGAMLKNLKFSLDMENKIMGKILDDGKEPEAAASEWLKANPSALEPWLAGVK
CCHHCCCCHHHHHHHCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCC
TRDGKGDALAAAKTGLGL
CCCCCCCEEEHHHCCCCC
>Mature Secondary Structure
MKTTSTFKLVTATAVAALSVATAAFAADPDSCSTVHFSDVGWTDITATTATASVVLKSIG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHCC
YQTDVKVLSVPVTYTSLKNKDIDIFLGNWMPTQEKDVRPYLDDKSVESFGPNLVGAKYTL
CCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEE
ATNAKGAELGIKDFKDIAAHKDDLDGKIYGIEPGNDGNRLVMDLIEKNTFGMKEMEVVES
EECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHC
SEQGMLAQVARAEKAGKPVVFLGWEPHPMNTNFKLTYLTGGDDVFGPDFGGAKVYTNVRA
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCC
GYLDECPNVGAMLKNLKFSLDMENKIMGKILDDGKEPEAAASEWLKANPSALEPWLAGVK
CCHHCCCCHHHHHHHCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCC
TRDGKGDALAAAKTGLGL
CCCCCCCEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]