Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is trxB [H]
Identifier: 209550301
GI number: 209550301
Start: 2768509
End: 2769483
Strand: Direct
Name: trxB [H]
Synonym: Rleg2_2721
Alternate gene names: 209550301
Gene position: 2768509-2769483 (Clockwise)
Preceding gene: 209550299
Following gene: 209550302
Centisome position: 61.01
GC content: 62.67
Gene sequence:
>975_bases ATGCCCGCCCGCCATACCAAGGTGCTCATCATCGGTTCCGGACCCGCAGGCTATACCGCCGCGGTCTATGCCGCGCGCGC CATGCTGAAGCCGGTTTTGATCGCCGGTCTCGAACAGGGCGGCCAGCTGATGATCACCACCGATGTGGAGAATTATCCGG GCTTTGCCGATCCCATCCAGGGCCCCTGGCTGATGGAACAGATGCTGCAGCAGGCAAAACATGTCGGCGCCGAGATCGTC AACGATCTGGTGACCGAAGTCGACATGAACCAGCGCCCCTTCGTCGCCCGCACCGACAGCGGCCAGGTCTGGACTGCCGA TACGCTGATCATCGCCACCGGCGCCAAGGCCAAGTGGCTCGGCATCGAGAGCGAGCAGCATTTCCAGGGCTTCGGCGTTT CGGCCTGCGCCACCTGCGACGGTTTCTTCTATCGCAACAAGAATGTGATCGTGGTCGGCGGCGGCAACAGCGCCGTCGAG GAGGCGCTCTACCTCTCCAACATCGCCAAGTCGGTGACATTGGTCCACCGCCGCGACTTCTTCCGGGCAGAAAAGATCCT GCAGGAACGCTTGTTCTCCAAGGAGAACGTCAAGGTGTTGTGGAACACCGAAGTGGCCGAAATCACCGGCACGCCGGCCA AGCCTCCGATGCCGCAATCCGTCTCCGGCGCACGACTGCGCGACGTCAAAACCGGCGCGATCACCGAGATGGCAATCGAT GGCGTTTTCGTCGCCATCGGCCATGCGCCGGCAACCGAGCTCTTCAAGGACAAACTGAAGCTGAAGGACAACGGCTATCT CTGGACGGCGCCGGACTCGACCGCGACCAGCCTGGAAGGGGTCTATGCCGCCGGCGACGTGACCGACGACACCTTCCGTC AGGCAATCACTGCCGCCGGTCTTGGATGCATGGCAGCGCTTGAAGCCGAGCGCTATCTGACGGGTCACATGCCCGTCGCC GTAGCCGCGGAGTAA
Upstream 100 bases:
>100_bases TTGAATAAAAGCATTGGACGTTCATAAATGGCGCAGGGACCGCGAAACGGCCGTAATCGCCACTTAGCCGCCGCCCTCCT GCCAGTCGAAAGGAAATGAC
Downstream 100 bases:
>100_bases GATCGGCATGAGGGGTGGGGGAATGCCATTGGATTGGGATAAGCTGCGTATTTTTCACGCAGCTGCCGAAGCGGGTTCGT TCACCCATGCGGCGGATAAA
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MPARHTKVLIIGSGPAGYTAAVYAARAMLKPVLIAGLEQGGQLMITTDVENYPGFADPIQGPWLMEQMLQQAKHVGAEIV NDLVTEVDMNQRPFVARTDSGQVWTADTLIIATGAKAKWLGIESEQHFQGFGVSACATCDGFFYRNKNVIVVGGGNSAVE EALYLSNIAKSVTLVHRRDFFRAEKILQERLFSKENVKVLWNTEVAEITGTPAKPPMPQSVSGARLRDVKTGAITEMAID GVFVAIGHAPATELFKDKLKLKDNGYLWTAPDSTATSLEGVYAAGDVTDDTFRQAITAAGLGCMAALEAERYLTGHMPVA VAAE
Sequences:
>Translated_324_residues MPARHTKVLIIGSGPAGYTAAVYAARAMLKPVLIAGLEQGGQLMITTDVENYPGFADPIQGPWLMEQMLQQAKHVGAEIV NDLVTEVDMNQRPFVARTDSGQVWTADTLIIATGAKAKWLGIESEQHFQGFGVSACATCDGFFYRNKNVIVVGGGNSAVE EALYLSNIAKSVTLVHRRDFFRAEKILQERLFSKENVKVLWNTEVAEITGTPAKPPMPQSVSGARLRDVKTGAITEMAID GVFVAIGHAPATELFKDKLKLKDNGYLWTAPDSTATSLEGVYAAGDVTDDTFRQAITAAGLGCMAALEAERYLTGHMPVA VAAE >Mature_323_residues PARHTKVLIIGSGPAGYTAAVYAARAMLKPVLIAGLEQGGQLMITTDVENYPGFADPIQGPWLMEQMLQQAKHVGAEIVN DLVTEVDMNQRPFVARTDSGQVWTADTLIIATGAKAKWLGIESEQHFQGFGVSACATCDGFFYRNKNVIVVGGGNSAVEE ALYLSNIAKSVTLVHRRDFFRAEKILQERLFSKENVKVLWNTEVAEITGTPAKPPMPQSVSGARLRDVKTGAITEMAIDG VFVAIGHAPATELFKDKLKLKDNGYLWTAPDSTATSLEGVYAAGDVTDDTFRQAITAAGLGCMAALEAERYLTGHMPVAV AAE
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=320, Percent_Identity=55.625, Blast_Score=342, Evalue=1e-95, Organism=Escherichia coli, GI87081763, Length=315, Percent_Identity=34.6031746031746, Blast_Score=139, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6321898, Length=322, Percent_Identity=42.5465838509317, Blast_Score=266, Evalue=4e-72, Organism=Saccharomyces cerevisiae, GI6320560, Length=320, Percent_Identity=42.5, Blast_Score=265, Evalue=1e-71,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 34847; Mature: 34716
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARHTKVLIIGSGPAGYTAAVYAARAMLKPVLIAGLEQGGQLMITTDVENYPGFADPIQ CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC GPWLMEQMLQQAKHVGAEIVNDLVTEVDMNQRPFVARTDSGQVWTADTLIIATGAKAKWL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECEEEEEECCCEEEE GIESEQHFQGFGVSACATCDGFFYRNKNVIVVGGGNSAVEEALYLSNIAKSVTLVHRRDF ECCCHHHHCCCCCHHHEECCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH FRAEKILQERLFSKENVKVLWNTEVAEITGTPAKPPMPQSVSGARLRDVKTGAITEMAID HHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHC GVFVAIGHAPATELFKDKLKLKDNGYLWTAPDSTATSLEGVYAAGDVTDDTFRQAITAAG EEEEEECCCCHHHHHHHHHEECCCCEEEECCCCCCHHCCCEEEECCCCHHHHHHHHHHHC LGCMAALEAERYLTGHMPVAVAAE HHHHHHHHHHHHEECCCCEEEECC >Mature Secondary Structure PARHTKVLIIGSGPAGYTAAVYAARAMLKPVLIAGLEQGGQLMITTDVENYPGFADPIQ CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC GPWLMEQMLQQAKHVGAEIVNDLVTEVDMNQRPFVARTDSGQVWTADTLIIATGAKAKWL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECEEEEEECCCEEEE GIESEQHFQGFGVSACATCDGFFYRNKNVIVVGGGNSAVEEALYLSNIAKSVTLVHRRDF ECCCHHHHCCCCCHHHEECCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH FRAEKILQERLFSKENVKVLWNTEVAEITGTPAKPPMPQSVSGARLRDVKTGAITEMAID HHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHC GVFVAIGHAPATELFKDKLKLKDNGYLWTAPDSTATSLEGVYAAGDVTDDTFRQAITAAG EEEEEECCCCHHHHHHHHHEECCCCEEEECCCCCCHHCCCEEEECCCCHHHHHHHHHHHC LGCMAALEAERYLTGHMPVAVAAE HHHHHHHHHHHHEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]