Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550100
Identifier: 209550100
GI number: 209550100
Start: 2550655
End: 2551410
Strand: Direct
Name: 209550100
Synonym: Rleg2_2517
Alternate gene names: NA
Gene position: 2550655-2551410 (Clockwise)
Preceding gene: 209550099
Following gene: 209550101
Centisome position: 56.21
GC content: 60.85
Gene sequence:
>756_bases ATGAAAATCGTTGTCATCGGCGGAACCGGCCTCATCGGTTCTAAAACTGTCGAACGCCTGCGCCAGAAGGGACATGAGGT GATTGCCGCCTCGCCGAACTCAGGCGTCAATACGATCACGGGAGAAGGACTGGCAGCGGCACTCGAGGGTGCGGAAGTCG TGCTCGACCTTGCCAATTCGCCCTCCTTCGAAGACAAGGCCGTTCTCGAATTCTTCGAGATCTCGGGGCGCAATCTTCTC GCCGCCGGGAAGATTGCCGGCGTGAAGCACCATATCGCGCTCTCCGTCATCGGCACCGAGCGGCTACAGGACAGCGGCTA TTTCCGCGGCAAGCTCGCCCAGGAAAAGCTGATTAAGGCGTCGGGCATTCCCTATACCATCGTGCATTCGACGCAGTTCA TGGAATTCCTGAACGGCATCGCCCAGTCCGGCACCGTCGGCCAGACGGTCCACCTGTCGCCGGCCTATGTGCAGCCGATC GCCTCCGACGATGTCGCCGACGCCATGGCTGACGTGGCGCTGTCGGCCCCCGCCAACGCCACGATCGAAATATCAGGTCC GGAACGGGCGCGTTTGAGCGAACTCGTCGCCCGATACCTGAAGGCGATGAAAGACCCGCGCACCGTCGAGGCCGATCCGG AAGCAAAATATTTCGGCGTCCGGCTCAACGACCACTCGCTCGTTTCCGACGACAACCCGCGGCTCGGTTCGATCACCTTC GAACAATGGTTCGCAAAATCCGCCCAGCCGAAGTGA
Upstream 100 bases:
>100_bases CCTACGGCCTCGACAAGGCCGGCTTGAACTAAACCCCACAATTCACTGAGAAGATTCACCTTTGACGCTGCCGCTCCCCG GCAGCGAACGGAGATCTGTT
Downstream 100 bases:
>100_bases TTTTGCCCCCGGGACGCGGCCACCGGCGCGCGTCCTCCCACCAACAAAAATGGAGATTCCAATGATCAGAGCATCGATCC TCGCCGCTGCCCTCGCCTGC
Product: NmrA family protein
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Secreted Protein; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-4-Dehydrorhamnose Reductase; Nucleoside-Diphosphate Sugar Epimerase; NmrA-Like; GCN5-Related N-Acetyltransferase; Transcriptional Regulator LysR-Family; LysR Family Transcriptional Regulator; NmrA-Like Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKIVVIGGTGLIGSKTVERLRQKGHEVIAASPNSGVNTITGEGLAAALEGAEVVLDLANSPSFEDKAVLEFFEISGRNLL AAGKIAGVKHHIALSVIGTERLQDSGYFRGKLAQEKLIKASGIPYTIVHSTQFMEFLNGIAQSGTVGQTVHLSPAYVQPI ASDDVADAMADVALSAPANATIEISGPERARLSELVARYLKAMKDPRTVEADPEAKYFGVRLNDHSLVSDDNPRLGSITF EQWFAKSAQPK
Sequences:
>Translated_251_residues MKIVVIGGTGLIGSKTVERLRQKGHEVIAASPNSGVNTITGEGLAAALEGAEVVLDLANSPSFEDKAVLEFFEISGRNLL AAGKIAGVKHHIALSVIGTERLQDSGYFRGKLAQEKLIKASGIPYTIVHSTQFMEFLNGIAQSGTVGQTVHLSPAYVQPI ASDDVADAMADVALSAPANATIEISGPERARLSELVARYLKAMKDPRTVEADPEAKYFGVRLNDHSLVSDDNPRLGSITF EQWFAKSAQPK >Mature_251_residues MKIVVIGGTGLIGSKTVERLRQKGHEVIAASPNSGVNTITGEGLAAALEGAEVVLDLANSPSFEDKAVLEFFEISGRNLL AAGKIAGVKHHIALSVIGTERLQDSGYFRGKLAQEKLIKASGIPYTIVHSTQFMEFLNGIAQSGTVGQTVHLSPAYVQPI ASDDVADAMADVALSAPANATIEISGPERARLSELVARYLKAMKDPRTVEADPEAKYFGVRLNDHSLVSDDNPRLGSITF EQWFAKSAQPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26725; Mature: 26725
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVVIGGTGLIGSKTVERLRQKGHEVIAASPNSGVNTITGEGLAAALEGAEVVLDLANS CEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCEECCCCHHHHHCCCEEEEEECCC PSFEDKAVLEFFEISGRNLLAAGKIAGVKHHIALSVIGTERLQDSGYFRGKLAQEKLIKA CCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEHHHHHCCCCCCCHHHHHHHHHH SGIPYTIVHSTQFMEFLNGIAQSGTVGQTVHLSPAYVQPIASDDVADAMADVALSAPANA CCCCEEEEEHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHCCCCCC TIEISGPERARLSELVARYLKAMKDPRTVEADPEAKYFGVRLNDHSLVSDDNPRLGSITF EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCEEH EQWFAKSAQPK HHHHHHCCCCC >Mature Secondary Structure MKIVVIGGTGLIGSKTVERLRQKGHEVIAASPNSGVNTITGEGLAAALEGAEVVLDLANS CEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCEECCCCHHHHHCCCEEEEEECCC PSFEDKAVLEFFEISGRNLLAAGKIAGVKHHIALSVIGTERLQDSGYFRGKLAQEKLIKA CCCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEEHHHHHCCCCCCCHHHHHHHHHH SGIPYTIVHSTQFMEFLNGIAQSGTVGQTVHLSPAYVQPIASDDVADAMADVALSAPANA CCCCEEEEEHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHCCCCCC TIEISGPERARLSELVARYLKAMKDPRTVEADPEAKYFGVRLNDHSLVSDDNPRLGSITF EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCEEH EQWFAKSAQPK HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA