Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is ydfG [H]
Identifier: 209550099
GI number: 209550099
Start: 2550107
End: 2550586
Strand: Direct
Name: ydfG [H]
Synonym: Rleg2_2516
Alternate gene names: 209550099
Gene position: 2550107-2550586 (Clockwise)
Preceding gene: 209550096
Following gene: 209550100
Centisome position: 56.2
GC content: 58.33
Gene sequence:
>480_bases ATGACCCAGCGATTGAACTACGCCCAGCAGTCCCCCGAGCTTTTCAAGAAATTCATGGAATTCAGCATGGCATTGCGCAG CAGCGTGATCGACGAGAAGCTTCAGGCCCTGATCGAGATCCGCGCTTCGCAGATCAACGGATGCGGCTTTTGCCTCGACA TGCATGTGAAGCAGGCGAAGATCCATGGCGAGACGGAACTGCGGCTCCATCACGTCGCCATCTGGCGGGAATCGAACCTC TTCGTCCCCCGCGAGCGTGCAGCCCTTGCCTGGACCGAAGCGCTGACGAAGCTTCCCGAAGGCGGCATTCACGACGAGAT TTACGAACGGGTTCGCGGCCAGCTTTCCGAAAAGGAAATCTCCGACTTGACCTTCGTCGTCATGGCCATCAATGCCTGGA ACCGCGTCAATGTCGGCTTCAAGACCGTTCCCGGCTCTGCCGACAAGGCCTACGGCCTCGACAAGGCCGGCTTGAACTAA
Upstream 100 bases:
>100_bases TATGCAGGCAAACTAGGCTGGAATGGCTTTACAGTCCAGCAATTACGGATATCGTTTATCCATAAGGATACTAAATATCC TTAATTAAGGGAGAAACGAC
Downstream 100 bases:
>100_bases ACCCCACAATTCACTGAGAAGATTCACCTTTGACGCTGCCGCTCCCCGGCAGCGAACGGAGATCTGTTATGAAAATCGTT GTCATCGGCGGAACCGGCCT
Product: alkylhydroperoxidase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTQRLNYAQQSPELFKKFMEFSMALRSSVIDEKLQALIEIRASQINGCGFCLDMHVKQAKIHGETELRLHHVAIWRESNL FVPRERAALAWTEALTKLPEGGIHDEIYERVRGQLSEKEISDLTFVVMAINAWNRVNVGFKTVPGSADKAYGLDKAGLN
Sequences:
>Translated_159_residues MTQRLNYAQQSPELFKKFMEFSMALRSSVIDEKLQALIEIRASQINGCGFCLDMHVKQAKIHGETELRLHHVAIWRESNL FVPRERAALAWTEALTKLPEGGIHDEIYERVRGQLSEKEISDLTFVVMAINAWNRVNVGFKTVPGSADKAYGLDKAGLN >Mature_158_residues TQRLNYAQQSPELFKKFMEFSMALRSSVIDEKLQALIEIRASQINGCGFCLDMHVKQAKIHGETELRLHHVAIWRESNLF VPRERAALAWTEALTKLPEGGIHDEIYERVRGQLSEKEISDLTFVVMAINAWNRVNVGFKTVPGSADKAYGLDKAGLN
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 18031; Mature: 17900
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRLNYAQQSPELFKKFMEFSMALRSSVIDEKLQALIEIRASQINGCGFCLDMHVKQAK CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH IHGETELRLHHVAIWRESNLFVPRERAALAWTEALTKLPEGGIHDEIYERVRGQLSEKEI HCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH SDLTFVVMAINAWNRVNVGFKTVPGSADKAYGLDKAGLN HHHHEEEEEECCCCCCCCCEEECCCCCCHHCCCCCCCCC >Mature Secondary Structure TQRLNYAQQSPELFKKFMEFSMALRSSVIDEKLQALIEIRASQINGCGFCLDMHVKQAK CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH IHGETELRLHHVAIWRESNLFVPRERAALAWTEALTKLPEGGIHDEIYERVRGQLSEKEI HCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH SDLTFVVMAINAWNRVNVGFKTVPGSADKAYGLDKAGLN HHHHEEEEEECCCCCCCCCEEECCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]