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The map label for this gene is soxR [C]

Identifier: 209550096

GI number: 209550096

Start: 2547079

End: 2547771

Strand: Direct

Name: soxR [C]

Synonym: Rleg2_2513

Alternate gene names: 209550096

Gene position: 2547079-2547771 (Clockwise)

Preceding gene: 209550094

Following gene: 209550099

Centisome position: 56.13

GC content: 61.9

Gene sequence:

>693_bases
ATGCCAGACGGTTCCAAACGCCTGTTTGCTGCCGCCGGTATCGCTTCGGAGGCCCGGTCGAAATACCGGTTTCTGCCTTC
GGCCGCGCTGCCGCCGGATCTACCGGATGGTCCGGTGCCTATTGCCGATATGGCCAACGCATTCGGCGTTACGCACAGGA
CACTGCATTTCTACGAAGAAAAGGGGTTGATTTCGGCCAATCGCATCGGCCTGATGCGGGTCTACGGCCAGGACGACGTG
ATGCGCATGGCTGTGATCACCGTCTGCCGCGAGACCGGCATGCCGATCGCCGTCATCCAGGAATTGATGGACGAGCTTCG
CAAGGCCGATTCGCAGGAAAGGGCCGAAACGATGTTTCGCGAGGCGCTGCAGGTGCGCAAGCGCGAGCTGACGGCCGAGA
TGTCGACGCTGCACCGCCAGCTCCAGCAGGTGGGCGACCTTCTGGACTACGACGACAGTGTCGAAGAGCCGCCGCTCAAT
GACAACCAGGACAGCGCAAGCCTGACCCCGCAGGAGCGGCGTTGCCTGGAACTGATGGCGGAGGGCTATTCCACCCAGCG
AATCGCCCGGGCGCTCGATCTGAAGCATGATGAGACCAGGGATCTCGAAGCCGGAATCATCCTGAAATTCCGCGCCAACA
ACCGCTTCCAGGCGATCGCCAAGGCCGTTCTGCTCGGCATCGTGCAGGCGTAA

Upstream 100 bases:

>100_bases
TCCCAATGATAAGAACGCCCAGAGGAAAACCCCACTCGCCGCGCCTGGGAAGCAACTGGCAAATCCGCATGAGGTGCAAC
ACGATGCCCTAGGAGGGTTC

Downstream 100 bases:

>100_bases
CCTTGAACGCCTGACGGCGCCGCAGACAACCTGGCCCACGCTCTCGACGGCCGCCACCGTCGCCTCCCGCCAATCCTATC
AGCGCACGATCGTCAGCGTC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Nodulation Protein

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MPDGSKRLFAAAGIASEARSKYRFLPSAALPPDLPDGPVPIADMANAFGVTHRTLHFYEEKGLISANRIGLMRVYGQDDV
MRMAVITVCRETGMPIAVIQELMDELRKADSQERAETMFREALQVRKRELTAEMSTLHRQLQQVGDLLDYDDSVEEPPLN
DNQDSASLTPQERRCLELMAEGYSTQRIARALDLKHDETRDLEAGIILKFRANNRFQAIAKAVLLGIVQA

Sequences:

>Translated_230_residues
MPDGSKRLFAAAGIASEARSKYRFLPSAALPPDLPDGPVPIADMANAFGVTHRTLHFYEEKGLISANRIGLMRVYGQDDV
MRMAVITVCRETGMPIAVIQELMDELRKADSQERAETMFREALQVRKRELTAEMSTLHRQLQQVGDLLDYDDSVEEPPLN
DNQDSASLTPQERRCLELMAEGYSTQRIARALDLKHDETRDLEAGIILKFRANNRFQAIAKAVLLGIVQA
>Mature_229_residues
PDGSKRLFAAAGIASEARSKYRFLPSAALPPDLPDGPVPIADMANAFGVTHRTLHFYEEKGLISANRIGLMRVYGQDDVM
RMAVITVCRETGMPIAVIQELMDELRKADSQERAETMFREALQVRKRELTAEMSTLHRQLQQVGDLLDYDDSVEEPPLND
NQDSASLTPQERRCLELMAEGYSTQRIARALDLKHDETRDLEAGIILKFRANNRFQAIAKAVLLGIVQA

Specific function: Activates The Transcription Of The Soxs Gene Which Itself Controls The Superoxide Response Regulon. Soxr Contains A 2fe-2s Iron-Sulfur Cluster That May Act As A Redox Sensor System That Recognizes Superoxide. The Variable Redox State Of The Fe-S Cluster I

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25757; Mature: 25626

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS50043 HTH_LUXR_2 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGSKRLFAAAGIASEARSKYRFLPSAALPPDLPDGPVPIADMANAFGVTHRTLHFYEE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KGLISANRIGLMRVYGQDDVMRMAVITVCRETGMPIAVIQELMDELRKADSQERAETMFR
CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
EALQVRKRELTAEMSTLHRQLQQVGDLLDYDDSVEEPPLNDNQDSASLTPQERRCLELMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EGYSTQRIARALDLKHDETRDLEAGIILKFRANNRFQAIAKAVLLGIVQA
CCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDGSKRLFAAAGIASEARSKYRFLPSAALPPDLPDGPVPIADMANAFGVTHRTLHFYEE
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KGLISANRIGLMRVYGQDDVMRMAVITVCRETGMPIAVIQELMDELRKADSQERAETMFR
CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
EALQVRKRELTAEMSTLHRQLQQVGDLLDYDDSVEEPPLNDNQDSASLTPQERRCLELMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EGYSTQRIARALDLKHDETRDLEAGIILKFRANNRFQAIAKAVLLGIVQA
CCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA