Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is yukJ [H]
Identifier: 209550068
GI number: 209550068
Start: 2518469
End: 2519512
Strand: Direct
Name: yukJ [H]
Synonym: Rleg2_2485
Alternate gene names: 209550068
Gene position: 2518469-2519512 (Clockwise)
Preceding gene: 209550067
Following gene: 209550070
Centisome position: 55.5
GC content: 62.93
Gene sequence:
>1044_bases ATGCTGAAGAATTACAAGGTCCTGAAGGGTACGGCGAGCGCACTCGCCCTTGACGACGACAACGATCCGCACATCGAGAT CCGCATCGAGGCGAACGGTATCAGCTACCGCATCGCGCTCAACGTCCGCTCGAAGGAATCGCCGCACGACCTGCTCTACG CCAACATCGGCGATTTCAAGCACCCGGCGCTGACGGAAGCGCTCGAAGAGCTGCCGATGGGCCTGACCGACATCCGCAAG GACCATCCGGAGCTGGCGATCGATTATGTCCGCGGTGGGCTGATCGAACGCGAAGACATGAACGTCGCGCCCTTCCAGCT ATCCGGTCCGAAGAACGACCTGCGTGATTTCATCGAGCCGATCGTCGAGGAAGGCATTGCCGATTCCGACGTGCATTTCT ACGCCTTCGGCGAGGCCTGGGGGCCGGAGAACAACAAGCCGGACCAATATTTCCATTTCGAGCCGGGCAACGGCATTCAC GACATCCACATGAATCAGGGTGACGGCGGCAGCTTCAAGGCCACCAACGGGCCGAACCAGGATGGCGCGCTGCTCGTCCA TTTCAACGATACCGACGAATGGGCGGCGATCTTCCTCTGCTTCCAGTCGCAGAACTGGAATACCGATGCGGCGACCGGCC ATCCCGTCTCCGACGGCCGCGGCGGCCAGGGCCGCGGCGAAGGCACCCGCCGGCCGCAGCCGATCGTCGCCTCGTCCCTG CGCATCATCGCCGCGCTGATCAACCCGGTCAACGGCGCAGGCGGCACGGAAGCCGAAACGGTGACGATCATCAACCGCTC CGACATGGCGGCATCGCTCGACGGCTGGAAGCTGGAAGACGAAAACGGCAGGACCCAGACGCTGTCGGGAACGCTTGAGG CCGGCGAACTGCGCACCATAGCGCTCGATGCCAGGAGCGGCGGTCCCCAGCTTGCCAACAGAGGCGGCGACATCATCCTA CGCAATACCGACGGCGCCGTGGCCGACCGTGTCGGCTACGGCAAGAGCGAAACGGCCAACGAAGGCTGGACGACTATATT TTGA
Upstream 100 bases:
>100_bases GCGATGACGAACCAGGCATTGCACGGCGAAAGACAGGCGTCATAAAAGATGCACTTTCGCCGTGTTAGCGTAAGAGCCCG CTACTCCTGCGAGGTTCGCC
Downstream 100 bases:
>100_bases TTGGTGTTCTGGCTGGCTCCCTCTTCTCTCCAGCGGGGAGAAGGTGGCCCGAAGGGTCGGATGAGGGGGCCACACGGCAC GCGTTTGCTTGCCTTCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MLKNYKVLKGTASALALDDDNDPHIEIRIEANGISYRIALNVRSKESPHDLLYANIGDFKHPALTEALEELPMGLTDIRK DHPELAIDYVRGGLIEREDMNVAPFQLSGPKNDLRDFIEPIVEEGIADSDVHFYAFGEAWGPENNKPDQYFHFEPGNGIH DIHMNQGDGGSFKATNGPNQDGALLVHFNDTDEWAAIFLCFQSQNWNTDAATGHPVSDGRGGQGRGEGTRRPQPIVASSL RIIAALINPVNGAGGTEAETVTIINRSDMAASLDGWKLEDENGRTQTLSGTLEAGELRTIALDARSGGPQLANRGGDIIL RNTDGAVADRVGYGKSETANEGWTTIF
Sequences:
>Translated_347_residues MLKNYKVLKGTASALALDDDNDPHIEIRIEANGISYRIALNVRSKESPHDLLYANIGDFKHPALTEALEELPMGLTDIRK DHPELAIDYVRGGLIEREDMNVAPFQLSGPKNDLRDFIEPIVEEGIADSDVHFYAFGEAWGPENNKPDQYFHFEPGNGIH DIHMNQGDGGSFKATNGPNQDGALLVHFNDTDEWAAIFLCFQSQNWNTDAATGHPVSDGRGGQGRGEGTRRPQPIVASSL RIIAALINPVNGAGGTEAETVTIINRSDMAASLDGWKLEDENGRTQTLSGTLEAGELRTIALDARSGGPQLANRGGDIIL RNTDGAVADRVGYGKSETANEGWTTIF >Mature_347_residues MLKNYKVLKGTASALALDDDNDPHIEIRIEANGISYRIALNVRSKESPHDLLYANIGDFKHPALTEALEELPMGLTDIRK DHPELAIDYVRGGLIEREDMNVAPFQLSGPKNDLRDFIEPIVEEGIADSDVHFYAFGEAWGPENNKPDQYFHFEPGNGIH DIHMNQGDGGSFKATNGPNQDGALLVHFNDTDEWAAIFLCFQSQNWNTDAATGHPVSDGRGGQGRGEGTRRPQPIVASSL RIIAALINPVNGAGGTEAETVTIINRSDMAASLDGWKLEDENGRTQTLSGTLEAGELRTIALDARSGGPQLANRGGDIIL RNTDGAVADRVGYGKSETANEGWTTIF
Specific function: Unknown
COG id: COG5634
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019268 [H]
Pfam domain/function: PF10042 DUF2278 [H]
EC number: NA
Molecular weight: Translated: 37659; Mature: 37659
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNYKVLKGTASALALDDDNDPHIEIRIEANGISYRIALNVRSKESPHDLLYANIGDFK CCCCCEEEECCCEEEEECCCCCCEEEEEEEECCEEEEEEEEECCCCCCCEEEEECCCCCC HPALTEALEELPMGLTDIRKDHPELAIDYVRGGLIEREDMNVAPFQLSGPKNDLRDFIEP CHHHHHHHHHCCCCHHHHHCCCCCEEHHHHHCCEEECCCCCCCCEEECCCHHHHHHHHHH IVEEGIADSDVHFYAFGEAWGPENNKPDQYFHFEPGNGIHDIHMNQGDGGSFKATNGPNQ HHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEECCCCCCC DGALLVHFNDTDEWAAIFLCFQSQNWNTDAATGHPVSDGRGGQGRGEGTRRPQPIVASSL CCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RIIAALINPVNGAGGTEAETVTIINRSDMAASLDGWKLEDENGRTQTLSGTLEAGELRTI HHHHHHHCCCCCCCCCCCEEEEEEECCCCEECCCCEEEECCCCCEEEEECCCCCCCEEEE ALDARSGGPQLANRGGDIILRNTDGAVADRVGYGKSETANEGWTTIF EEECCCCCCHHHCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCEECC >Mature Secondary Structure MLKNYKVLKGTASALALDDDNDPHIEIRIEANGISYRIALNVRSKESPHDLLYANIGDFK CCCCCEEEECCCEEEEECCCCCCEEEEEEEECCEEEEEEEEECCCCCCCEEEEECCCCCC HPALTEALEELPMGLTDIRKDHPELAIDYVRGGLIEREDMNVAPFQLSGPKNDLRDFIEP CHHHHHHHHHCCCCHHHHHCCCCCEEHHHHHCCEEECCCCCCCCEEECCCHHHHHHHHHH IVEEGIADSDVHFYAFGEAWGPENNKPDQYFHFEPGNGIHDIHMNQGDGGSFKATNGPNQ HHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEECCCCCCC DGALLVHFNDTDEWAAIFLCFQSQNWNTDAATGHPVSDGRGGQGRGEGTRRPQPIVASSL CCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RIIAALINPVNGAGGTEAETVTIINRSDMAASLDGWKLEDENGRTQTLSGTLEAGELRTI HHHHHHHCCCCCCCCCCCEEEEEEECCCCEECCCCEEEECCCCCEEEEECCCCCCCEEEE ALDARSGGPQLANRGGDIILRNTDGAVADRVGYGKSETANEGWTTIF EEECCCCCCHHHCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9168598; 9384377; 8226620 [H]