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The map label for this gene is ndoA [H]

Identifier: 209549882

GI number: 209549882

Start: 2352968

End: 2353279

Strand: Direct

Name: ndoA [H]

Synonym: Rleg2_2298

Alternate gene names: 209549882

Gene position: 2352968-2353279 (Clockwise)

Preceding gene: 209549881

Following gene: 209549883

Centisome position: 51.85

GC content: 61.54

Gene sequence:

>312_bases
ATGACCTGGGTTTCAGCTGGCAAACTCGACGACATCGAACAGGAAGGCGCCATCCGCTTCGACCATGGCGGGCGCACCTA
CGCGATCTACCGTGGTCCGGACGACAGCGTCTACTGCACCGCCGGGCTCTGCACCCACGAGGCGATCCATCTCGCCGACG
GGCTGGTGATGGATTTCGAGGTGGAATGTCCGAAACATTCCGGCGCCTTCGACTATCGCACCGGCGAAGCCCTCAGGCTT
CCCGCCTGCGAAAATCTGAAAACCTATCCGGCAGAGGTGATCGACGGAGAGGTTCGCGTGGCTCTGGCTTGA

Upstream 100 bases:

>100_bases
GCTCGCCCGAGGGCGAAGCGCAGATGCAGGAACGCTACCGCAGGCGCAAGGAAAAACTCGCGGCCCGCAAGGCCCGCCTG
GAAGTCGGGGGAGCCGCCGA

Downstream 100 bases:

>100_bases
TGCATGTCGCCCGGACCTGCGCAGCGCTTCAGGCGTTGGTTTTTATGTCCTCACGAGCGCCGGCCGCTCTTTCCACGGAG
ACAACATGGACGGTATCGTC

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTWVSAGKLDDIEQEGAIRFDHGGRTYAIYRGPDDSVYCTAGLCTHEAIHLADGLVMDFEVECPKHSGAFDYRTGEALRL
PACENLKTYPAEVIDGEVRVALA

Sequences:

>Translated_103_residues
MTWVSAGKLDDIEQEGAIRFDHGGRTYAIYRGPDDSVYCTAGLCTHEAIHLADGLVMDFEVECPKHSGAFDYRTGEALRL
PACENLKTYPAEVIDGEVRVALA
>Mature_102_residues
TWVSAGKLDDIEQEGAIRFDHGGRTYAIYRGPDDSVYCTAGLCTHEAIHLADGLVMDFEVECPKHSGAFDYRTGEALRLP
ACENLKTYPAEVIDGEVRVALA

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11292; Mature: 11161

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWVSAGKLDDIEQEGAIRFDHGGRTYAIYRGPDDSVYCTAGLCTHEAIHLADGLVMDFE
CCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEECCCCCCEEECCCCEEEEEE
VECPKHSGAFDYRTGEALRLPACENLKTYPAEVIDGEVRVALA
EECCCCCCCEEECCCCEEECCCCCCCCCCCHHHCCCEEEEEEC
>Mature Secondary Structure 
TWVSAGKLDDIEQEGAIRFDHGGRTYAIYRGPDDSVYCTAGLCTHEAIHLADGLVMDFE
CCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEECCCCCCEEECCCCEEEEEE
VECPKHSGAFDYRTGEALRLPACENLKTYPAEVIDGEVRVALA
EECCCCCCCEEECCCCEEECCCCCCCCCCCHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA