| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549407
Identifier: 209549407
GI number: 209549407
Start: 1862268
End: 1863110
Strand: Reverse
Name: 209549407
Synonym: Rleg2_1813
Alternate gene names: NA
Gene position: 1863110-1862268 (Counterclockwise)
Preceding gene: 209549408
Following gene: 209549404
Centisome position: 41.06
GC content: 61.8
Gene sequence:
>843_bases ATGAAGATACGCGCCGGGTTTCATCTGGGCTATGAATGCATACAGCCGACGCCGATGCTGCTCGCTCTCAACATTCATCC TTCGCGCCGCGCCGATCTTCTCAGCGAGCAGGTGCTGACATTCGACCGGCCGATCGAGGCCTGGGAATATACCGACGGTT TCGGCAATGCCTGCAGCCGGATCGTCGCCCCGGCTGGAGTAACGACGATTTCCACGGCGTTCGAGATCTACGACAGCGGC CAACCCGACGTCGTTCCCGACGATGCCGTCCAGCATGCGATCAACGACTTGCCGGACGAGGTGCTCGTCTTCCTGCTCGG TAGCCGCTATTGCGACACCGACAGGCTCGCCGATTTCGCCTGGGCAACCTTCTCGTCGACGCCGCTCGGCTGGGCGCGCG TCCAGGCGATCTGTGATTTCGTCCATGACCACATCACCTTCGACTATCTGAAGGCCGACCTGCTGCGGACCGCGCATGGC GGCTTCGTCGACAAGGCAGGTGTCTGCCGCGACTTTGCCCATCTCGCCATCGCGCTTTGCCGATGCATGAATATCCCAGC CCGATACTGCACAGGCTATCTCGGCGATATCGGCGTTCCGATCGATCCCAATCCGATGGATTTCAGCGCCTGGTTCGAGG TCTTTCTCGGCGGCCACTGGCATACGGTCGATGCCCGCCACAACACGCCGCGAATCGGCAGGATCCTGATGGGCACCGGC CGCGACGCCACCGACGTCGCAATGTCGACGGCCTTCGGACCGGCAGTGCTTTGCCGCTTCGAGGTGATCACCGAGGAAGT GCCGCAGGAAGCGGCTGATAAGGCCGATCCTATGCCTTCTTGA
Upstream 100 bases:
>100_bases AACTTCGGTTTGGGCGCGGCGACAGTTGCGGCTGCGGGAACCGGGCAGCACGATCGGCGTTGCATAGTCACGCCATCTGT CGGGATGTTAGGACGCCACA
Downstream 100 bases:
>100_bases GGAATTCCGTTTTCAACACCAGACCCTTGACCTGCTTGGTGCTGCATTCGATCTCGCCTGGATTGTCGGTCAGGCGAATG CCCTTGACCAGCGTTCCGCG
Product: transglutaminase
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase Family Protein; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Cysteine Protease Transglutaminase-Like Protein; Transglutaminase-Like S Cysteine Proteases; Protease Transglutaminase-Like; Cysteine Protease; Transglutaminase/Protease-Like Protein; Transglutaminase/Protease; Transglutaminase-Like S Cysteine Protease; Transglutaminase-Like Cysteine Protease; Transglutaminase; Cystein Protease
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKIRAGFHLGYECIQPTPMLLALNIHPSRRADLLSEQVLTFDRPIEAWEYTDGFGNACSRIVAPAGVTTISTAFEIYDSG QPDVVPDDAVQHAINDLPDEVLVFLLGSRYCDTDRLADFAWATFSSTPLGWARVQAICDFVHDHITFDYLKADLLRTAHG GFVDKAGVCRDFAHLAIALCRCMNIPARYCTGYLGDIGVPIDPNPMDFSAWFEVFLGGHWHTVDARHNTPRIGRILMGTG RDATDVAMSTAFGPAVLCRFEVITEEVPQEAADKADPMPS
Sequences:
>Translated_280_residues MKIRAGFHLGYECIQPTPMLLALNIHPSRRADLLSEQVLTFDRPIEAWEYTDGFGNACSRIVAPAGVTTISTAFEIYDSG QPDVVPDDAVQHAINDLPDEVLVFLLGSRYCDTDRLADFAWATFSSTPLGWARVQAICDFVHDHITFDYLKADLLRTAHG GFVDKAGVCRDFAHLAIALCRCMNIPARYCTGYLGDIGVPIDPNPMDFSAWFEVFLGGHWHTVDARHNTPRIGRILMGTG RDATDVAMSTAFGPAVLCRFEVITEEVPQEAADKADPMPS >Mature_280_residues MKIRAGFHLGYECIQPTPMLLALNIHPSRRADLLSEQVLTFDRPIEAWEYTDGFGNACSRIVAPAGVTTISTAFEIYDSG QPDVVPDDAVQHAINDLPDEVLVFLLGSRYCDTDRLADFAWATFSSTPLGWARVQAICDFVHDHITFDYLKADLLRTAHG GFVDKAGVCRDFAHLAIALCRCMNIPARYCTGYLGDIGVPIDPNPMDFSAWFEVFLGGHWHTVDARHNTPRIGRILMGTG RDATDVAMSTAFGPAVLCRFEVITEEVPQEAADKADPMPS
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30865; Mature: 30865
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRAGFHLGYECIQPTPMLLALNIHPSRRADLLSEQVLTFDRPIEAWEYTDGFGNACSR CEECCCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHH IVAPAGVTTISTAFEIYDSGQPDVVPDDAVQHAINDLPDEVLVFLLGSRYCDTDRLADFA HHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHH WATFSSTPLGWARVQAICDFVHDHITFDYLKADLLRTAHGGFVDKAGVCRDFAHLAIALC HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RCMNIPARYCTGYLGDIGVPIDPNPMDFSAWFEVFLGGHWHTVDARHNTPRIGRILMGTG HHHCCCHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECC RDATDVAMSTAFGPAVLCRFEVITEEVPQEAADKADPMPS CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKIRAGFHLGYECIQPTPMLLALNIHPSRRADLLSEQVLTFDRPIEAWEYTDGFGNACSR CEECCCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHH IVAPAGVTTISTAFEIYDSGQPDVVPDDAVQHAINDLPDEVLVFLLGSRYCDTDRLADFA HHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHH WATFSSTPLGWARVQAICDFVHDHITFDYLKADLLRTAHGGFVDKAGVCRDFAHLAIALC HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RCMNIPARYCTGYLGDIGVPIDPNPMDFSAWFEVFLGGHWHTVDARHNTPRIGRILMGTG HHHCCCHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECC RDATDVAMSTAFGPAVLCRFEVITEEVPQEAADKADPMPS CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA