| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549408
Identifier: 209549408
GI number: 209549408
Start: 1863210
End: 1864082
Strand: Reverse
Name: 209549408
Synonym: Rleg2_1814
Alternate gene names: NA
Gene position: 1864082-1863210 (Counterclockwise)
Preceding gene: 209549410
Following gene: 209549407
Centisome position: 41.08
GC content: 61.97
Gene sequence:
>873_bases ATGACGATTTTCTCCGTCCGCCACATCACGTCCTATCGTTACGTCAGGGATGTCGATTTCGGCGAGCATCGCTTGATGTT CCGGCCGCGTGACAGCTTCGACCAGCGGCTGATCGAAGCGTCGTTGACGATATATCCCGAGGAAAGTCATGTGCGCTGGA TCCACGATGTTTTCGGCAATTGCGTGGCGCTCATCGATATTTCGAGGCCGGCGTCCGAGCTTCGATTCGAAACCTGGATC ACGCTCGATCATACGCCCCAGGTTGCCCTCGACCTCAAGGTGGACGACCAGGCGCTGACCTATCCGTTCTCCTACGACAA GGACGAGATTGCCGATTTGACGCCGGCCATGCAGCGCCATTATCCCGACCCCAACGACGAAGTCGGACGCTGGGCACGCC GGTTCGTGCGCCAGGGGCGTCCGACCGAGACCGGGCACATGCTGATGACGCTCTGTTACGCCATTCGGGAAAGCTTCGTC TATGCGCGCCGGATGGAGCACGGAACGCAGACACCGCTGCAGACTTTGCAACTTCGCTCCGGCACCTGCCGGGATTTCGC GCTGCTGATGATGGAGGCGGCACGCGTCCTCGGCCTCGCGGCGCGGTTTGTCACGGGCTATGTCTATGTTCCCGACCGGG ACGGCTCCACCGTGCTCGGCGGCGGTTCCACCCATGCATGGTGCCAGGTTTACCTTCCGGGCGCCGGCTGGGCGGAGTTC GATCCGACCAACGGGATCGTCGGCAACCGCGATCTCATTCGGGTCGCCGTCGCCCGCGATCCGCGTCAGGCCGTCCCGTT GAGCGGCAGCTATGATGGCGATGGGGCGGATTTCGACAGCATGACAGTGCAGGTCAACGTCACCACGAAGTAA
Upstream 100 bases:
>100_bases TTGATGCAGAATAGCAATCTTTCGAATGTGCTTATATGACAAGAAATCGGGATAAGCAGGAAGCTGGCAGGGCGCGCCTC ACGCAGAGGAAAGCCGGCCC
Downstream 100 bases:
>100_bases ACTTCGGTTTGGGCGCGGCGACAGTTGCGGCTGCGGGAACCGGGCAGCACGATCGGCGTTGCATAGTCACGCCATCTGTC GGGATGTTAGGACGCCACAA
Product: transglutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTIFSVRHITSYRYVRDVDFGEHRLMFRPRDSFDQRLIEASLTIYPEESHVRWIHDVFGNCVALIDISRPASELRFETWI TLDHTPQVALDLKVDDQALTYPFSYDKDEIADLTPAMQRHYPDPNDEVGRWARRFVRQGRPTETGHMLMTLCYAIRESFV YARRMEHGTQTPLQTLQLRSGTCRDFALLMMEAARVLGLAARFVTGYVYVPDRDGSTVLGGGSTHAWCQVYLPGAGWAEF DPTNGIVGNRDLIRVAVARDPRQAVPLSGSYDGDGADFDSMTVQVNVTTK
Sequences:
>Translated_290_residues MTIFSVRHITSYRYVRDVDFGEHRLMFRPRDSFDQRLIEASLTIYPEESHVRWIHDVFGNCVALIDISRPASELRFETWI TLDHTPQVALDLKVDDQALTYPFSYDKDEIADLTPAMQRHYPDPNDEVGRWARRFVRQGRPTETGHMLMTLCYAIRESFV YARRMEHGTQTPLQTLQLRSGTCRDFALLMMEAARVLGLAARFVTGYVYVPDRDGSTVLGGGSTHAWCQVYLPGAGWAEF DPTNGIVGNRDLIRVAVARDPRQAVPLSGSYDGDGADFDSMTVQVNVTTK >Mature_289_residues TIFSVRHITSYRYVRDVDFGEHRLMFRPRDSFDQRLIEASLTIYPEESHVRWIHDVFGNCVALIDISRPASELRFETWIT LDHTPQVALDLKVDDQALTYPFSYDKDEIADLTPAMQRHYPDPNDEVGRWARRFVRQGRPTETGHMLMTLCYAIRESFVY ARRMEHGTQTPLQTLQLRSGTCRDFALLMMEAARVLGLAARFVTGYVYVPDRDGSTVLGGGSTHAWCQVYLPGAGWAEFD PTNGIVGNRDLIRVAVARDPRQAVPLSGSYDGDGADFDSMTVQVNVTTK
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2569c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 32974; Mature: 32842
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFSVRHITSYRYVRDVDFGEHRLMFRPRDSFDQRLIEASLTIYPEESHVRWIHDVFGN CEEEEEEHHHHHHEEEECCCCCCEEEECCCCHHHHHHHHHHEEEEECCCCHHHHHHHHCC CVALIDISRPASELRFETWITLDHTPQVALDLKVDDQALTYPFSYDKDEIADLTPAMQRH EEEEEECCCCHHHCEEEEEEEECCCCCEEEEEEECCCEEECCCCCCHHHHHHHCHHHHHC YPDPNDEVGRWARRFVRQGRPTETGHMLMTLCYAIRESFVYARRMEHGTQTPLQTLQLRS CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC GTCRDFALLMMEAARVLGLAARFVTGYVYVPDRDGSTVLGGGSTHAWCQVYLPGAGWAEF CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCCCCCEEEEEEECCCCCCCC DPTNGIVGNRDLIRVAVARDPRQAVPLSGSYDGDGADFDSMTVQVNVTTK CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure TIFSVRHITSYRYVRDVDFGEHRLMFRPRDSFDQRLIEASLTIYPEESHVRWIHDVFGN EEEEEEHHHHHHEEEECCCCCCEEEECCCCHHHHHHHHHHEEEEECCCCHHHHHHHHCC CVALIDISRPASELRFETWITLDHTPQVALDLKVDDQALTYPFSYDKDEIADLTPAMQRH EEEEEECCCCHHHCEEEEEEEECCCCCEEEEEEECCCEEECCCCCCHHHHHHHCHHHHHC YPDPNDEVGRWARRFVRQGRPTETGHMLMTLCYAIRESFVYARRMEHGTQTPLQTLQLRS CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC GTCRDFALLMMEAARVLGLAARFVTGYVYVPDRDGSTVLGGGSTHAWCQVYLPGAGWAEF CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCCCCCEEEEEEECCCCCCCC DPTNGIVGNRDLIRVAVARDPRQAVPLSGSYDGDGADFDSMTVQVNVTTK CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]