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The map label for this gene is yjhH [C]

Identifier: 209549286

GI number: 209549286

Start: 1719389

End: 1720315

Strand: Reverse

Name: yjhH [C]

Synonym: Rleg2_1689

Alternate gene names: 209549286

Gene position: 1720315-1719389 (Counterclockwise)

Preceding gene: 209549287

Following gene: 209549281

Centisome position: 37.91

GC content: 63.21

Gene sequence:

>927_bases
ATGATGAACCCGATTGAATTGAAGAAGGCCGTCGGTAGTGGTCTCCTCTCGTTTCCGGTGACGCATTTCGACGATCAGCT
GACATTCGACGAGGCGAAATACCGTCGTCATGTCGAATGGCTTTCGGGTTTTGACGCGGCTGCGCTGTTTGCCGCCGGCG
GCACGGGAGAGTTCTTCTCCCTCAATCCGGCCGAAATCCCGCAGGTCGTCCGCGCCGCCAAGGCCTCGGCCGGCAAGACG
CCGATCATCTCGGGCACCGGCTACGGCACGTCGCTCGCCATCGAGATCGCAAAGGCGGCCGAGAAGGCAGGCGCGGACGG
GCTGCTGCTGCTGCCGCCCTATCTGATGTTTGCCGAGCAGGCCGGCCTGATCGCCCATGTCAAGGCAGTCTGCCAATCGG
TCGGCATCGGCGTCATCGTCTATAACCGCGACAACGCCGTCCTGACCGCCGAGAGCATCGCGCGGCTTGCGGAGGAATGC
CCGAACCTGATCGGTTTCAAGGACGGTGTCGGCGATGTCGACAAGGTGATCGAGATCACCACGCTGCTCGGCGACCGGCT
GGTCTATGTCGGCGGCATGCCGACCCACGAGGTCTATGCGCAAGCCTATTTCGCCGCCGGTGTAACGACCTATTCCTCGG
CCGTCTTCAACTTCGTCCCGGCGCTGGCCCAGCGCTTTTACGGCGCCTTGCGGACCGGCGATCAGGCGACCGTCGACGAA
ATCCTGAAGAGCTTCTTCTTCCCCTTCGTCGCCTTGCGCAACCGCAAGAAGGGTTATGCCGTCTCGATCATCAAGGCCGG
TCTGCGCGTGCTGGGGCAGAACCCAGGCCCGGTGCGGCCGCCGCTGACGGATCTCAACCAGGAAGAACTGGCGCTCTTGG
ACAAGATCGTCCAGGCCAACGGCGTCTCGCGGATCGCGGCGGAGTAG

Upstream 100 bases:

>100_bases
CACCGCATTCGCCTATTGCTACGGCTATATCGCAGCCCTTCTGCAGACGCTCGAAAGCGCCTGAGACGGCCAATATCAAC
AGGTAAGGAACAGGACTTTC

Downstream 100 bases:

>100_bases
TCGAGGGTTACCTCCATCAACGATCAAAACCGCCGGGCTTGCTCGGCGGTTTTGTCGTTGTCAGCCATCCGTCAATTTAC
GCCCACAGCATGTCGCGCAT

Product: 5-dehydro-4-deoxyglucarate dehydratase

Products: NA

Alternate protein names: 5-keto-4-deoxy-glucarate dehydratase; KDGDH [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MMNPIELKKAVGSGLLSFPVTHFDDQLTFDEAKYRRHVEWLSGFDAAALFAAGGTGEFFSLNPAEIPQVVRAAKASAGKT
PIISGTGYGTSLAIEIAKAAEKAGADGLLLLPPYLMFAEQAGLIAHVKAVCQSVGIGVIVYNRDNAVLTAESIARLAEEC
PNLIGFKDGVGDVDKVIEITTLLGDRLVYVGGMPTHEVYAQAYFAAGVTTYSSAVFNFVPALAQRFYGALRTGDQATVDE
ILKSFFFPFVALRNRKKGYAVSIIKAGLRVLGQNPGPVRPPLTDLNQEELALLDKIVQANGVSRIAAE

Sequences:

>Translated_308_residues
MMNPIELKKAVGSGLLSFPVTHFDDQLTFDEAKYRRHVEWLSGFDAAALFAAGGTGEFFSLNPAEIPQVVRAAKASAGKT
PIISGTGYGTSLAIEIAKAAEKAGADGLLLLPPYLMFAEQAGLIAHVKAVCQSVGIGVIVYNRDNAVLTAESIARLAEEC
PNLIGFKDGVGDVDKVIEITTLLGDRLVYVGGMPTHEVYAQAYFAAGVTTYSSAVFNFVPALAQRFYGALRTGDQATVDE
ILKSFFFPFVALRNRKKGYAVSIIKAGLRVLGQNPGPVRPPLTDLNQEELALLDKIVQANGVSRIAAE
>Mature_308_residues
MMNPIELKKAVGSGLLSFPVTHFDDQLTFDEAKYRRHVEWLSGFDAAALFAAGGTGEFFSLNPAEIPQVVRAAKASAGKT
PIISGTGYGTSLAIEIAKAAEKAGADGLLLLPPYLMFAEQAGLIAHVKAVCQSVGIGVIVYNRDNAVLTAESIARLAEEC
PNLIGFKDGVGDVDKVIEITTLLGDRLVYVGGMPTHEVYAQAYFAAGVTTYSSAVFNFVPALAQRFYGALRTGDQATVDE
ILKSFFFPFVALRNRKKGYAVSIIKAGLRVLGQNPGPVRPPLTDLNQEELALLDKIVQANGVSRIAAE

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI87082415, Length=302, Percent_Identity=26.4900662251656, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788823, Length=178, Percent_Identity=30.3370786516854, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786463, Length=200, Percent_Identity=31, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017655
- InterPro:   IPR002220 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.41 [H]

Molecular weight: Translated: 32853; Mature: 32853

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNPIELKKAVGSGLLSFPVTHFDDQLTFDEAKYRRHVEWLSGFDAAALFAAGGTGEFFS
CCCHHHHHHHHCCCHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCCCCEE
LNPAEIPQVVRAAKASAGKTPIISGTGYGTSLAIEIAKAAEKAGADGLLLLPPYLMFAEQ
CCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHH
AGLIAHVKAVCQSVGIGVIVYNRDNAVLTAESIARLAEECPNLIGFKDGVGDVDKVIEIT
CCHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHH
TLLGDRLVYVGGMPTHEVYAQAYFAAGVTTYSSAVFNFVPALAQRFYGALRTGDQATVDE
HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ILKSFFFPFVALRNRKKGYAVSIIKAGLRVLGQNPGPVRPPLTDLNQEELALLDKIVQAN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GVSRIAAE
CCHHHCCC
>Mature Secondary Structure
MMNPIELKKAVGSGLLSFPVTHFDDQLTFDEAKYRRHVEWLSGFDAAALFAAGGTGEFFS
CCCHHHHHHHHCCCHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCCCCEE
LNPAEIPQVVRAAKASAGKTPIISGTGYGTSLAIEIAKAAEKAGADGLLLLPPYLMFAEQ
CCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHH
AGLIAHVKAVCQSVGIGVIVYNRDNAVLTAESIARLAEECPNLIGFKDGVGDVDKVIEIT
CCHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHH
TLLGDRLVYVGGMPTHEVYAQAYFAAGVTTYSSAVFNFVPALAQRFYGALRTGDQATVDE
HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ILKSFFFPFVALRNRKKGYAVSIIKAGLRVLGQNPGPVRPPLTDLNQEELALLDKIVQAN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
GVSRIAAE
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA