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The map label for this gene is ygiV [H]

Identifier: 209549243

GI number: 209549243

Start: 1674722

End: 1675603

Strand: Reverse

Name: ygiV [H]

Synonym: Rleg2_1644

Alternate gene names: 209549243

Gene position: 1675603-1674722 (Counterclockwise)

Preceding gene: 209549246

Following gene: 209549242

Centisome position: 36.92

GC content: 63.27

Gene sequence:

>882_bases
ATGAAGGCGGCGCTGCAAAACTACCATGCCCGAATGCAGCGGGTGCTTGACCACATAGACCGGCACCTCGACGACGATCT
GGACCTGGAAACGGTGAGCGGCGTTGCCGCCTTCTCAAAGTTCCATTTCCACCGGCAGTTCACGGCGACCTTCGGTCTGT
CCGTGCATCGCTATATCCAGCTTGCCCGGATGAAGCGCGCTTCGCACCGGCTGGCCTACAGGGATGCGCAAAGCGTCACC
GAGATAGCGATGGATGCCGGTTACGACGCACCGGATGCCTTCGCCCGCGCCTTTCGGCAACGGTTCGGGCAATCGCCTTC
GACGTTCCGGAAGTCTCCCGACTGGGAGCCGTGGCTTGCCGCCTTCGGGCCTCTCGACAACGCTAGGAGCAAGTTCATGC
AGAAGAGTTTTACCACCGACGACGTGACGATTCGATATGTGCCGCCGACGCCGGTGGCGATCACCGAGCATCGGGGCGAC
CCGGCGACGCTCGGCGCCACCATCCAGCGGTTCATCGCCTGGCGCACGGCCGCCGGCCTGCACCCCAGGACAAATCCGAC
CTTCAACGTCTGGCGTTCTGAGCGGCGCCCCGCCTCGCCTGCGGATTATAGCGTGGATCTCTGTGTCGGGACCGATCAGC
CGATCGCGGTAAATGGCGACGAGATCAAGGCCGGCGAGATCCCCGGCGGACGCTGCGCCGTGCTGCGCGTCGTCGGCAAC
ACCGACAATCTGGAGCCCGCCGCGCTCTATCTCTATCGCGACTGGCTTCCGTTGAGCGGCGAAGAAGCACGCGATTTCCC
GATCTATTGCCAGCGGCTGAGCTTCTTTCCGGAGGTGCCGGAGCATGAGGCGGTCGCGGAATTGTTTCTGCCGCTGAAAT
AA

Upstream 100 bases:

>100_bases
ATCCTTGGCAATGTCCTGCGACCCGTGAGAAAACCGCAAGATCGGTCGAGCGCGTCAGGCCGGCCCGCGCTTAGTTGATG
CTGCCACGGAGGACAGACGG

Downstream 100 bases:

>100_bases
CGCTCTCTGGCGGCGGCCTATCGTTTCTGATCGGAAGATCCCGACAGGCCGCTATTCTCCCATTCATGGTTCAGGGCTCG
CCAAACGCAAAAAGGTGATT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKAALQNYHARMQRVLDHIDRHLDDDLDLETVSGVAAFSKFHFHRQFTATFGLSVHRYIQLARMKRASHRLAYRDAQSVT
EIAMDAGYDAPDAFARAFRQRFGQSPSTFRKSPDWEPWLAAFGPLDNARSKFMQKSFTTDDVTIRYVPPTPVAITEHRGD
PATLGATIQRFIAWRTAAGLHPRTNPTFNVWRSERRPASPADYSVDLCVGTDQPIAVNGDEIKAGEIPGGRCAVLRVVGN
TDNLEPAALYLYRDWLPLSGEEARDFPIYCQRLSFFPEVPEHEAVAELFLPLK

Sequences:

>Translated_293_residues
MKAALQNYHARMQRVLDHIDRHLDDDLDLETVSGVAAFSKFHFHRQFTATFGLSVHRYIQLARMKRASHRLAYRDAQSVT
EIAMDAGYDAPDAFARAFRQRFGQSPSTFRKSPDWEPWLAAFGPLDNARSKFMQKSFTTDDVTIRYVPPTPVAITEHRGD
PATLGATIQRFIAWRTAAGLHPRTNPTFNVWRSERRPASPADYSVDLCVGTDQPIAVNGDEIKAGEIPGGRCAVLRVVGN
TDNLEPAALYLYRDWLPLSGEEARDFPIYCQRLSFFPEVPEHEAVAELFLPLK
>Mature_293_residues
MKAALQNYHARMQRVLDHIDRHLDDDLDLETVSGVAAFSKFHFHRQFTATFGLSVHRYIQLARMKRASHRLAYRDAQSVT
EIAMDAGYDAPDAFARAFRQRFGQSPSTFRKSPDWEPWLAAFGPLDNARSKFMQKSFTTDDVTIRYVPPTPVAITEHRGD
PATLGATIQRFIAWRTAAGLHPRTNPTFNVWRSERRPASPADYSVDLCVGTDQPIAVNGDEIKAGEIPGGRCAVLRVVGN
TDNLEPAALYLYRDWLPLSGEEARDFPIYCQRLSFFPEVPEHEAVAELFLPLK

Specific function: Represses expression of mcbR [H]

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994918, Length=155, Percent_Identity=34.1935483870968, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790857, Length=109, Percent_Identity=33.0275229357798, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 33135; Mature: 33135

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAALQNYHARMQRVLDHIDRHLDDDLDLETVSGVAAFSKFHFHRQFTATFGLSVHRYIQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARMKRASHRLAYRDAQSVTEIAMDAGYDAPDAFARAFRQRFGQSPSTFRKSPDWEPWLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH
AFGPLDNARSKFMQKSFTTDDVTIRYVPPTPVAITEHRGDPATLGATIQRFIAWRTAAGL
HHCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCC
HPRTNPTFNVWRSERRPASPADYSVDLCVGTDQPIAVNGDEIKAGEIPGGRCAVLRVVGN
CCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCEEECCCCCCCEEEEEEECC
TDNLEPAALYLYRDWLPLSGEEARDFPIYCQRLSFFPEVPEHEAVAELFLPLK
CCCCCHHEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKAALQNYHARMQRVLDHIDRHLDDDLDLETVSGVAAFSKFHFHRQFTATFGLSVHRYIQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARMKRASHRLAYRDAQSVTEIAMDAGYDAPDAFARAFRQRFGQSPSTFRKSPDWEPWLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCHHHH
AFGPLDNARSKFMQKSFTTDDVTIRYVPPTPVAITEHRGDPATLGATIQRFIAWRTAAGL
HHCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCC
HPRTNPTFNVWRSERRPASPADYSVDLCVGTDQPIAVNGDEIKAGEIPGGRCAVLRVVGN
CCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCEEECCCCCCCEEEEEEECC
TDNLEPAALYLYRDWLPLSGEEARDFPIYCQRLSFFPEVPEHEAVAELFLPLK
CCCCCHHEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]