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The map label for this gene is ytcA

Identifier: 209400980

GI number: 209400980

Start: 5232014

End: 5232289

Strand: Reverse

Name: ytcA

Synonym: ECH74115_5591

Alternate gene names: 209400980

Gene position: 5232289-5232014 (Counterclockwise)

Preceding gene: 209397725

Following gene: 209400246

Centisome position: 93.9

GC content: 47.83

Gene sequence:

>276_bases
ATGCCAACAGTTCTCTCTCGCATGGCGATGCAACTCAAAAAAACAGCCTGGATAATTCCCGTCTTCATGGTTTCGGGATG
CTCATTATCTCCGGCAATCCCGGTGATCGGCGCTTATTATCCCAGCTGGTTTTTCTGCGCCATTGCCAGCCTTATATTGA
CGCTCATCACGAGGCGAGTTATTCAGCGGGCAAATATCAAGCTGGCATTTGTCGGAATTATTTATACCGCCCTTTTTGCT
CTCTACGCCATGCTGTTCTGGCTGGCATTTTTCTAA

Upstream 100 bases:

>100_bases
AAGCTATTTTTATTCATCAAGAAAATAGCCATACTGACGCATTCAATGGATATTGATATTCACTACAGATATTGTTCGCA
GCAGACAGGATGTATTTAAT

Downstream 100 bases:

>100_bases
TCTATTTGAGACGCGCTCATGGAAAGTACGCCGAAAAAAGCTCCTCGCAGTAAATTCCCTGCTCTGTTAGTGGTTGCGTT
GGCGCTGGTTGCCCTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRVIQRANIKLAFVGIIYTALFA
LYAMLFWLAFF

Sequences:

>Translated_91_residues
MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRVIQRANIKLAFVGIIYTALFA
LYAMLFWLAFF
>Mature_90_residues
PTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRVIQRANIKLAFVGIIYTALFAL
YAMLFWLAFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential). Membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ytcA family

Homologues:

Organism=Escherichia coli, GI145693213, Length=91, Percent_Identity=98.9010989010989, Blast_Score=177, Evalue=9e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTCA_ECO57 (Q8X2V8)

Other databases:

- EMBL:   BA000007
- PIR:   A91262
- RefSeq:   NP_313092.1
- EnsemblBacteria:   EBESCT00000055224
- GeneID:   916213
- GenomeReviews:   BA000007_GR
- KEGG:   ecs:ECs5065
- GeneTree:   EBGT00050000012171
- HOGENOM:   HBG511717
- ProtClustDB:   CLSK881236
- BioCyc:   ECOL83334:ECS5065-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10271; Mature: 10140

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x133d6584)-; HASH(0x133f9004)-;

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQRANIKLAFVGIIYTALFALYAMLFWLAFF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure 
PTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQRANIKLAFVGIIYTALFALYAMLFWLAFF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11258796