| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is 209400962
Identifier: 209400962
GI number: 209400962
Start: 5380314
End: 5380454
Strand: Direct
Name: 209400962
Synonym: ECH74115_5744
Alternate gene names: NA
Gene position: 5380314-5380454 (Clockwise)
Preceding gene: 209399815
Following gene: 209397917
Centisome position: 96.56
GC content: 40.43
Gene sequence:
>141_bases ATGTCTGTTTCCTTTAAAAATATGTGGCAAACAAGTGCCGAGTATTATAGCCAACTCGCGCCGAATGTCTTCGCTTGTTT TCGTCTTCATTTTCCTTTTTCGCCAGTTTTAAGACGGTATGCAGAGCAGGAAAATCCATAA
Upstream 100 bases:
>100_bases GTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTACCCG CAGGGACGTTGAGTAAGCTC
Downstream 100 bases:
>100_bases CCGTAGCCGCATTTTTCATAGTGAGATGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGA TGTAACGCAATCCGTTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MSVSFKNMWQTSAEYYSQLAPNVFACFRLHFPFSPVLRRYAEQENP
Sequences:
>Translated_46_residues MSVSFKNMWQTSAEYYSQLAPNVFACFRLHFPFSPVLRRYAEQENP >Mature_45_residues SVSFKNMWQTSAEYYSQLAPNVFACFRLHFPFSPVLRRYAEQENP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5489; Mature: 5358
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSFKNMWQTSAEYYSQLAPNVFACFRLHFPFSPVLRRYAEQENP CCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure SVSFKNMWQTSAEYYSQLAPNVFACFRLHFPFSPVLRRYAEQENP CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA