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The map label for this gene is slp [H]

Identifier: 209400492

GI number: 209400492

Start: 4490151

End: 4490717

Strand: Direct

Name: slp [H]

Synonym: ECH74115_4854

Alternate gene names: 209400492

Gene position: 4490151-4490717 (Clockwise)

Preceding gene: 209400025

Following gene: 209396199

Centisome position: 80.58

GC content: 45.5

Gene sequence:

>567_bases
ATGAACATGACAAAAGGTGCACTCATACTCAGCCTTTCATTTTTGCTTGCAGCATGTAGTTCAATTCCGCAAAATATCAA
AGGAAATAACCAACCTGATATTCAAAAAAGTTTTGTTGCTGTTCATAACCAGCCGGGGTTATATGTTGGTCAACAAGCGC
GCTTTGGTGGGAAGGTTATCAACGTTATCAATGGCAAAACGGATACGTTGTTAGAAATCGCTGTATTACCGTTGGATAGC
TATGCGAAGCCTGATATTGAAGCCAACTATCAGGGCCGACTGCTCGCCAGACAAAGCGGCTTCCTTGATCCAGTGAACTA
TCGTAATCACTTTGTTACCATCCTCGGCACCATTCAGGGTGAACAACCTGGCTTTATCAATAAAGTCCCGTATAACTTCC
TGGAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGTGGGATTACGGC
TATGGTGCATTCTGGCCGGAACCGGGCTGGGGTGCGCCTTACTACACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGT
CAAATAA

Upstream 100 bases:

>100_bases
ACAGGTTTACGTTACTATCAGGCATATCGCCTCAGAATCAGATGAAAACTATAAAGAAATATCTATTATGGTTTTAATAT
TTGTTGATAAGGATAGTAAC

Downstream 100 bases:

>100_bases
CACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAACTATTA
TTATTATAAGCCCTGTCCTG

Product: outer membrane lipoprotein, Slp family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDS
YAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
YGAFWPEPGWGAPYYTNAVSQVTPELVK

Sequences:

>Translated_188_residues
MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDS
YAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
YGAFWPEPGWGAPYYTNAVSQVTPELVK
>Mature_188_residues
MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDS
YAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
YGAFWPEPGWGAPYYTNAVSQVTPELVK

Specific function: The induction of slp may help to stabilize the outer membrane during carbon starvation and stationary phase [H]

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082278, Length=188, Percent_Identity=99.468085106383, Blast_Score=386, Evalue=1e-109,
Organism=Escherichia coli, GI1788108, Length=149, Percent_Identity=43.6241610738255, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 20948; Mature: 20948

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCEEECCCCCCCCEEE
NVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQG
EEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECC
EQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYGYGAFWPEPGWGAPYYTNAVS
CCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
QVTPELVK
HHCHHHCC
>Mature Secondary Structure
MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCEEECCCCCCCCEEE
NVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQG
EEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECC
EQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYGYGAFWPEPGWGAPYYTNAVS
CCCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
QVTPELVK
HHCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022277; 8041620; 9278503 [H]