Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is sfsA
Identifier: 209400329
GI number: 209400329
Start: 165085
End: 165789
Strand: Reverse
Name: sfsA
Synonym: ECH74115_0155
Alternate gene names: 209400329
Gene position: 165789-165085 (Counterclockwise)
Preceding gene: 209400335
Following gene: 209399928
Centisome position: 2.98
GC content: 49.36
Gene sequence:
>705_bases ATGGAATTTTCTCCCCCTCTACAGCGCGCGACGCTAATTCAGCGTTACAAACGTTTTTTAGCCGATGTGATCACACCCGA TGGTCGCGAATTAACGCTACACTGCCCGAATACGGGTGCGATGACCGGTTGTGCAACGCCTGGCGATACCGTCTGGTATT CGACTTCAGACAACACCAAACGGAAATACCCACACACCTGGGAATTAACTCAAAGCCAGAGCGGCGCATTTATTTGCGTC AACACGCTTTGGGCTAACAGGTTGACGAAAGAGGCTATCCTTAATGAATCAATTTCAGAACTGTCAGGCTATAGCTCGCT GAAAAGCGAAGTAAAATACGGCGCAGAACGCAGCCGTATTGACTTTATGTTGCAGGCGGATTCGCGTCCAGACTGCTATA TTGAAGTGAAATCGGTTACGTTAGCGGAGAACGAACAGGGATATTTTCCCGATGCGGTCACTGAACGAGGTCAGAAACAC CTTCGGGAGTTGATGAGCGTAGCGGCTGAAGGCCAGCGTGCGGTTATCTTTTTCGCCGTGCTGCATTCAGCCATTACACG GTTTTCACCCGCGCGCCACATCGATGAGAAATACGCGCAACTATTGTCAGAAGCTCAACAGAGGGGGGTAGAAATTCTGG CTTACAAAGCGGAAATTTCTGCTGAAGGCATGGCTCTTAAAAAATCACTGCCGGTTACATTGTAG
Upstream 100 bases:
>100_bases TGACGGAGTTCACCCTTTACGCCTCCTCGTTTGCCCGTGGACGCACACGCTACACGCCGCTAAAACGCTGGGTGCTAACG CAATAACAAGGATTGTCGCA
Downstream 100 bases:
>100_bases TAAAGTAAGTAACTGGTTAATTTACATTCTGGTCGCGTGCGCAAATACGCTTTTCCTCACACAGTTGTCAAGTGTTACGT TTAGATAATTGCTATCCGGA
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICV NTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH LRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL
Sequences:
>Translated_234_residues MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICV NTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH LRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL >Mature_234_residues MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICV NTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH LRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL
Specific function: Probable regulatory factor involved in maltose metabolism
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=234, Percent_Identity=100, Blast_Score=490, Evalue=1e-140,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_ECO24 (A7ZHN7)
Other databases:
- EMBL: CP000800 - RefSeq: YP_001461316.1 - STRING: A7ZHN7 - EnsemblBacteria: EBESCT00000018934 - GeneID: 5588404 - GenomeReviews: CP000800_GR - KEGG: ecw:EcE24377A_0150 - eggNOG: COG1489 - GeneTree: EBGT00050000009831 - HOGENOM: HBG655520 - OMA: NTGSMLN - ProtClustDB: PRK00347 - BioCyc: ECOL331111:ECE24377A_0150-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 26229; Mature: 26229
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTK CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCC RKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRI CCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE DFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAV EEEEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEHHCCCCCCC >Mature Secondary Structure MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTK CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCC RKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRI CCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE DFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAV EEEEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA