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The map label for this gene is yehC [H]

Identifier: 209399857

GI number: 209399857

Start: 2863461

End: 2864135

Strand: Reverse

Name: yehC [H]

Synonym: ECH74115_3093

Alternate gene names: 209399857

Gene position: 2864135-2863461 (Counterclockwise)

Preceding gene: 209397648

Following gene: 209400432

Centisome position: 51.4

GC content: 38.96

Gene sequence:

>675_bases
ATGAAAGGGTTATTATCTTTACTCATCTCTTCTATGATATTCCCCGTGCATGCCGGAATGGTTATTTTCGGGACCCGTAT
CATTTACCCGGCAGAGCAGAAAGAGGTCATGGTACAACTGATGAATCAGGGAAACCGCTCTTCGCTGATGCAGGCGTGGA
TTGATGATGGCGACACGTCTCTGCCGCCAGAAAAGATTCAGGTTCCTTTCATGTTAACGCCACCAGTAGTGAAAGTAGCG
GCCAATTCTGGGCAACAAATAAAAATTAAAATCATGCCTAATAAATTACCCAGTAATAAGGAAAGTATTTTTTATCTTAA
TGTTCTGGATATTCCACCGAATAGCCCAGAAGATGAAGGAAAGAATGCGTTAAAATTTGCCATGCAAAACAGAATCAAGT
TGTTTTACCGACCTGCTGGTATTGCTCCGGTAAATAAAACGACTTTTAAAAAATTACGAGTGAGTCGTAGCGGTAATAAC
GTAGTCATAAAAAATGACTCGCCAAATTGGGTAACGATTTCTGATGTTAAGGCTAATAACGTCAAAGTGAATTATGAAAC
AATCATGATTGCACCACAAGAAAGTCAGAATGTTAGTGAAAAAAATAATAATGCGAATGGCTGGCAACTGACCATTATCG
ATGATCACGGCAACTATATTAGTGACAAAATTTAA

Upstream 100 bases:

>100_bases
TGCCCAGGATTAAATATTTAAAATAATCATCTTGTTTTTTCAGTAAGTTAAAATGGCCGCCATATTCATGGCGGCCAGCA
TAAATATAAGAGGCATTAAG

Downstream 100 bases:

>100_bases
TTGCAGGAGCTGCCTATGTTGAGAATGACCCCGCTTGCATCAGCAATAGTCGCGTTATTGCTCGGCATTGAAGCACATGC
AGCAGAAGAAACCTTTGACA

Product: gram-negative pilus assembly chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKGLLSLLISSMIFPVHAGMVIFGTRIIYPAEQKEVMVQLMNQGNRSSLMQAWIDDGDTSLPPEKIQVPFMLTPPVVKVA
ANSGQQIKIKIMPNKLPSNKESIFYLNVLDIPPNSPEDEGKNALKFAMQNRIKLFYRPAGIAPVNKTTFKKLRVSRSGNN
VVIKNDSPNWVTISDVKANNVKVNYETIMIAPQESQNVSEKNNNANGWQLTIIDDHGNYISDKI

Sequences:

>Translated_224_residues
MKGLLSLLISSMIFPVHAGMVIFGTRIIYPAEQKEVMVQLMNQGNRSSLMQAWIDDGDTSLPPEKIQVPFMLTPPVVKVA
ANSGQQIKIKIMPNKLPSNKESIFYLNVLDIPPNSPEDEGKNALKFAMQNRIKLFYRPAGIAPVNKTTFKKLRVSRSGNN
VVIKNDSPNWVTISDVKANNVKVNYETIMIAPQESQNVSEKNNNANGWQLTIIDDHGNYISDKI
>Mature_224_residues
MKGLLSLLISSMIFPVHAGMVIFGTRIIYPAEQKEVMVQLMNQGNRSSLMQAWIDDGDTSLPPEKIQVPFMLTPPVVKVA
ANSGQQIKIKIMPNKLPSNKESIFYLNVLDIPPNSPEDEGKNALKFAMQNRIKLFYRPAGIAPVNKTTFKKLRVSRSGNN
VVIKNDSPNWVTISDVKANNVKVNYETIMIAPQESQNVSEKNNNANGWQLTIIDDHGNYISDKI

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1788428, Length=224, Percent_Identity=87.9464285714286, Blast_Score=404, Evalue=1e-114,
Organism=Escherichia coli, GI1786333, Length=232, Percent_Identity=36.2068965517241, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1789532, Length=218, Percent_Identity=30.2752293577982, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1790771, Length=219, Percent_Identity=27.8538812785388, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788677, Length=201, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786936, Length=223, Percent_Identity=26.457399103139, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1786743, Length=221, Percent_Identity=29.4117647058824, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787171, Length=225, Percent_Identity=24.8888888888889, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87082203, Length=223, Percent_Identity=28.6995515695067, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87081806, Length=197, Percent_Identity=25.3807106598985, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 25023; Mature: 25023

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLLSLLISSMIFPVHAGMVIFGTRIIYPAEQKEVMVQLMNQGNRSSLMQAWIDDGDTS
CHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
LPPEKIQVPFMLTPPVVKVAANSGQQIKIKIMPNKLPSNKESIFYLNVLDIPPNSPEDEG
CCHHHEEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCC
KNALKFAMQNRIKLFYRPAGIAPVNKTTFKKLRVSRSGNNVVIKNDSPNWVTISDVKANN
HHHHHHHHHCCEEEEEECCCCCCCCHHHHEEEEEECCCCEEEEECCCCCEEEEEECCCCC
VKVNYETIMIAPQESQNVSEKNNNANGWQLTIIDDHGNYISDKI
EEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKGLLSLLISSMIFPVHAGMVIFGTRIIYPAEQKEVMVQLMNQGNRSSLMQAWIDDGDTS
CHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
LPPEKIQVPFMLTPPVVKVAANSGQQIKIKIMPNKLPSNKESIFYLNVLDIPPNSPEDEG
CCHHHEEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCC
KNALKFAMQNRIKLFYRPAGIAPVNKTTFKKLRVSRSGNNVVIKNDSPNWVTISDVKANN
HHHHHHHHHCCEEEEEECCCCCCCCHHHHEEEEEECCCCEEEEECCCCCEEEEEECCCCC
VKVNYETIMIAPQESQNVSEKNNNANGWQLTIIDDHGNYISDKI
EEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]