| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yehB [H]
Identifier: 209400432
GI number: 209400432
Start: 2860965
End: 2863445
Strand: Reverse
Name: yehB [H]
Synonym: ECH74115_3092
Alternate gene names: 209400432
Gene position: 2863445-2860965 (Counterclockwise)
Preceding gene: 209399857
Following gene: 209396961
Centisome position: 51.39
GC content: 44.82
Gene sequence:
>2481_bases ATGTTGAGAATGACCCCGCTTGCATCAGCAATAGTCGCGTTATTGCTCGGCATTGAAGCACATGCAGCAGAAGAAACCTT TGACACCCATTTTATGATGGGAGGAATGAAAGGTGAGCAAGTAACAAATTTGCGTCTTGATGATAATCAGCCTTTACCTG GGCAGTACGACATTGATATTTATGTCAATAAACAATGGCGTGGAAAATATGAGATTATCGTCAAAGATAACCCACATGAA ACTTGCCTGACGCGTGAAATTGTAAAGCGGTTAGGTATAAATAGCGATAATTTTGCACGCGAAAATCAGTGTTTAACATT TGAGCAACTTGTTCAGGGCGGAAGCTACTCCTGGGATATTGGGATTTTTCGTTTGGATCTCGCTGTTCCGCAAGCCTGGG TTGAAGAGCTGGAAAATGGTTACGTTCCGCCAGAAAACTGGGAGCGGGGAATCAATGCGTTTTATACGTCTTATTACGTA AGTCAGTATTACAGTGACTATAAAGCCTCGGGCAATAGTAAGAGCACTTATGTGCGTTTTAACAGTGGGCTAAATTTGCT GGGATGGCAGCTGCATTCAGATGCCAGTTTTAGCAAAACGGATAATAATCCTGGTGAGTGGAAAAGCAACACGCTGTATC TGGAGCATGGATTTTCTCAAATTCTCGGTACGCTGCGTATTGGTGATATGTACACCTCAGCCGATATATTTGATTCCGTT CGCTTCACCGGGGTTCGGTTATTTCGTGATATGCAGATGTTGCCAAACTCGAAGCAAAATTTTACCCCACGGGTACAGGG GATTGCCCAGAGTAACGCGTTGGTAACTATTGAACAGAACGGTTTTGTCGTTTATCAGAAAGAGGTTCCACCAGGTCCGT TTTCGATTAGTGATTTGCAGTTAGCGGGCGGAGGGGCGGATCTTGATGTTAGTGTTAAGGAAGCCGATGGTTCTGTGACT ACGTATCTGGTGCCTTATGCGGCAGTACCTAATATGCTGCAACCTGGTGTATCAAAATATGATTTTGCGGCAGGCCGTAG TCATATTGAAGGTGCGAGCAAGCAAAGTGATTTTGTCCAGGCGGGTTATCAGTATGGTTTTAATAATTTATTGACGCTGT ATGGCGGCACGATGGTTGCTAATAATTACTATGCCTTTACCCTCGGAACAGGTTGGAACACGCGTATTGGCGCAATTTCA GTCGATGCAACTAAATCGCACAGTAAGCAAGACAATGGTGATGTGTTTGACGGACAAAGTTATCAAATTGCCTATAACAA ATTTTTGAGCCAAACATCAACACGTTTTGGTCTGGCGGCCTGGCGTTATTCGTCGCGTGATTACCGCACATTTAACGATT ATGTGTGGGCAAATAATAAAGATAATTATCGTCGTGATAAAAACGATGTCTATGATATTGCCGATTATTACCAGAATGAT TTTGGTCGCAAAAATAGCTTTTCCGCCAATATGAGTCAGTCATTGCCAGAAGGCTGGGGATCTGTGTCATTAAGTACTTT ATGGCGTGATTACTGGGGGCGAAGCGGCAGTAGTAAAGATTATCAACTGAGTTATTCCAATAACTGGCGGCGGATAAGCT ATACCCTCGCGGCAAGCCAGGCGTATGACGAGAACCACGCCGAAGAGAAACGCTTTAATATTTTTATATCGATTCCCTTT GACTGGGGCGATGACGTTACGACGCCGCGACGGCAAATATATATGTCTAACTCAACGACCTTTGATGATCAGGGTTTTGC TTCAAACAATACCGGATTATCGGGAACCGTTGGGAACCGCGATCAGTTTAACTATGGTATCAACTTGAGCCATCAACATC AGGGAAATGAAACGACAGCTGGGGCCAATTTGACCTGGACCGCACCGGCCGCAACAGTGAATGGCAGCTATAGTCAGTCG AGTACTTATCGACAGGTCGGAGCCAGTGTTTCAGGGGGACTGGTTGCCTGGTCTGGTGGCGTTAATCTGGCGAACCGTCT TTCCGAAACGTTTGCTGTGATGCATGCGCCGGGAATCAAAGATGCTTATGTCAATGGGCAAAAATATCGTACAACAAACT GTAATGGTGTGGTGGTGTACGACGGACTGACACCTTATCGGGAAAATCACCTGATGATGGATGTGTCGCAAAGCGATAGC GAAACAGAATTACGCGGGAACCGTAAAATGACCGCCCCTTATCGCGGCGCGGTCGTTCTGGTTGATTTTGATACCGATCA GCGTAAGCCCTGGTTTATAAAAGCATTAAGATCCGATGGACAGCCATTAACGTTTGGTTATGAAGTCAATGATATGCATG GTCATAACATTGGTGTTGTCGGCCAGGGCAGTCAGATATTTATTCGCACCAATGAAATACCGCCAGCGGTTAATGTGGCA ATTGATAAGCAACAAGGGCTTTCATGCACAATCACCTTCGGTAAAGAGATTGATGAAAGTAAAAATTATATCTGTCGGTG A
Upstream 100 bases:
>100_bases TGTTAGTGAAAAAAATAATAATGCGAATGGCTGGCAACTGACCATTATCGATGATCACGGCAACTATATTAGTGACAAAA TTTAATTGCAGGAGCTGCCT
Downstream 100 bases:
>100_bases GAGGTGAAATATGATGTTCAGAAATAGAATATTACTAATATTTATATTGTGGGCTAATTTTACCTGGGCTGGGTGTCGTA CTACTGCATCATTAAATATT
Product: fimbrial usher protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 826; Mature: 826
Protein sequence:
>826_residues MLRMTPLASAIVALLLGIEAHAAEETFDTHFMMGGMKGEQVTNLRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPHE TCLTREIVKRLGINSDNFARENQCLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYV SQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSADIFDSV RFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFSISDLQLAGGGADLDVSVKEADGSVT TYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAIS VDATKSHSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDIADYYQND FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDENHAEEKRFNIFISIPF DWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNRDQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQS STYRQVGASVSGGLVAWSGGVNLANRLSETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDS ETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDMHGHNIGVVGQGSQIFIRTNEIPPAVNVA IDKQQGLSCTITFGKEIDESKNYICR
Sequences:
>Translated_826_residues MLRMTPLASAIVALLLGIEAHAAEETFDTHFMMGGMKGEQVTNLRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPHE TCLTREIVKRLGINSDNFARENQCLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYV SQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSADIFDSV RFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFSISDLQLAGGGADLDVSVKEADGSVT TYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAIS VDATKSHSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDIADYYQND FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDENHAEEKRFNIFISIPF DWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNRDQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQS STYRQVGASVSGGLVAWSGGVNLANRLSETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDS ETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDMHGHNIGVVGQGSQIFIRTNEIPPAVNVA IDKQQGLSCTITFGKEIDESKNYICR >Mature_826_residues MLRMTPLASAIVALLLGIEAHAAEETFDTHFMMGGMKGEQVTNLRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPHE TCLTREIVKRLGINSDNFARENQCLTFEQLVQGGSYSWDIGIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYV SQYYSDYKASGNSKSTYVRFNSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSADIFDSV RFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFSISDLQLAGGGADLDVSVKEADGSVT TYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAIS VDATKSHSKQDNGDVFDGQSYQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDIADYYQND FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDENHAEEKRFNIFISIPF DWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNRDQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQS STYRQVGASVSGGLVAWSGGVNLANRLSETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDS ETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDMHGHNIGVVGQGSQIFIRTNEIPPAVNVA IDKQQGLSCTITFGKEIDESKNYICR
Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fimbrial export usher family [H]
Homologues:
Organism=Escherichia coli, GI1788427, Length=826, Percent_Identity=92.4939467312349, Blast_Score=1613, Evalue=0.0, Organism=Escherichia coli, GI1786332, Length=853, Percent_Identity=30.9495896834701, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI1790772, Length=796, Percent_Identity=30.2763819095477, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI1787172, Length=772, Percent_Identity=31.4766839378238, Blast_Score=346, Evalue=3e-96, Organism=Escherichia coli, GI1786744, Length=803, Percent_Identity=29.2652552926526, Blast_Score=321, Evalue=1e-88, Organism=Escherichia coli, GI1789533, Length=789, Percent_Identity=27.7566539923954, Blast_Score=300, Evalue=4e-82, Organism=Escherichia coli, GI87081778, Length=577, Percent_Identity=26.5164644714038, Blast_Score=200, Evalue=4e-52, Organism=Escherichia coli, GI1789610, Length=784, Percent_Identity=24.234693877551, Blast_Score=135, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000015 - InterPro: IPR018030 [H]
Pfam domain/function: PF00577 Usher [H]
EC number: NA
Molecular weight: Translated: 92550; Mature: 92550
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS01151 FIMBRIAL_USHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRMTPLASAIVALLLGIEAHAAEETFDTHFMMGGMKGEQVTNLRLDDNQPLPGQYDIDI CCCCCHHHHHHHHHHHCCHHHHCHHHCCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEE YVNKQWRGKYEIIVKDNPHETCLTREIVKRLGINSDNFARENQCLTFEQLVQGGSYSWDI EECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCCEEEE GIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKSTYVRF EEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE NSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSADIFDSV CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHEEECCEECCHHHHHHH RFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFSISDLQ HHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEECCCEEEEECCCCCCCCCCCEEE LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ EECCCCCEEEEEEECCCCEEEEEEEHHHCCHHHCCCCCCHHHHCCCHHHCCCCCHHHHHH AGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQS HHHHHCCCCEEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEECCCC YQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDIADYYQND EEHHHHHHHHHCCCHHEEEEEEECCCCCCEECCEEEECCCCCCCCCCCHHHHHHHHHHHH FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQ CCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEECH AYDENHAEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNR HCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC DQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQSSTYRQVGASVSGGLVAWSGG CCEEECEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHCCCCCCCEEEEECC VNLANRLSETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDS CHHHHHHHHHHHEEECCCCCHHEECCCEEEECCCCEEEEECCCCCCCCCEEEEEECCCCC ETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDMHGHNIGVV CHHHCCCCEECCCCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCEEEEE GQGSQIFIRTNEIPPAVNVAIDKQQGLSCTITFGKEIDESKNYICR ECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MLRMTPLASAIVALLLGIEAHAAEETFDTHFMMGGMKGEQVTNLRLDDNQPLPGQYDIDI CCCCCHHHHHHHHHHHCCHHHHCHHHCCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEE YVNKQWRGKYEIIVKDNPHETCLTREIVKRLGINSDNFARENQCLTFEQLVQGGSYSWDI EECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHCCCCCEEEE GIFRLDLAVPQAWVEELENGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKSTYVRF EEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE NSGLNLLGWQLHSDASFSKTDNNPGEWKSNTLYLEHGFSQILGTLRIGDMYTSADIFDSV CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHEEECCEECCHHHHHHH RFTGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFSISDLQ HHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEECCCEEEEECCCCCCCCCCCEEE LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ EECCCCCEEEEEEECCCCEEEEEEEHHHCCHHHCCCCCCHHHHCCCHHHCCCCCHHHHHH AGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQS HHHHHCCCCEEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEECCCC YQIAYNKFLSQTSTRFGLAAWRYSSRDYRTFNDYVWANNKDNYRRDKNDVYDIADYYQND EEHHHHHHHHHCCCHHEEEEEEECCCCCCEECCEEEECCCCCCCCCCCHHHHHHHHHHHH FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQ CCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEECH AYDENHAEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGNR HCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC DQFNYGINLSHQHQGNETTAGANLTWTAPAATVNGSYSQSSTYRQVGASVSGGLVAWSGG CCEEECEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHCCCCCCCEEEEECC VNLANRLSETFAVMHAPGIKDAYVNGQKYRTTNCNGVVVYDGLTPYRENHLMMDVSQSDS CHHHHHHHHHHHEEECCCCCHHEECCCEEEECCCCEEEEECCCCCCCCCEEEEEECCCCC ETELRGNRKMTAPYRGAVVLVDFDTDQRKPWFIKALRSDGQPLTFGYEVNDMHGHNIGVV CHHHCCCCEECCCCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCEEEEE GQGSQIFIRTNEIPPAVNVAIDKQQGLSCTITFGKEIDESKNYICR ECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 9097040 [H]