| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is hcr [H]
Identifier: 209399450
GI number: 209399450
Start: 1045650
End: 1046618
Strand: Reverse
Name: hcr [H]
Synonym: ECH74115_1033
Alternate gene names: 209399450
Gene position: 1046618-1045650 (Counterclockwise)
Preceding gene: 209398927
Following gene: 209400223
Centisome position: 18.78
GC content: 55.42
Gene sequence:
>969_bases ATGACGATGCCAACGAATCAATGCCCGTGGCGGATGCAGGTTCATCACATTAAGCAAGAAACGCCGGATGTGTGGACGAT TTCCCTGATTTGCCACGATTACTACCCATACCGCGCCGGGCAATATGCACTGGTCAGCGTGCGTAACTCAGCGGAAACGC TGCGTGCTTACACCATTTCCTCCACGCCAGGCGTGAGTGAATATATCACCCTGACCGTGCGGCGGATTGATGACGGTGTC GGCTCCCAGTGGCTGACCCGCGATGTAAAACGCGGTGATTATCTCTGGCTTTCAGACGCGATGGGGGAATTTACCTGCGA CGATAAAGCAGAAGATAAATTCCTGTTGCTGGCTGCAGGCTGCGGCGTCACGCCGATTATGTCGATGCGTCGCTGGCTGG CGAAGAACCGTCCACAGGCCGATGTGCGGGTGATCTACAACGTGCGTACGCCGCAGGATGTTATTTTCGCCGATGAGTGG CGTAACTATCCGGTAACGCTGGTGGCGGAAAATAACGTTACCGAAGGCTTTATCGCTGGTCGTCTCACTCGCGAACTCCT GACTCGCGTTCCTGACTTAGCTTCACGTACCGTGATGACCTGCGGCCCGGCTCCGTATATGGATTGGGTAGAGCAGGAAG TGAAAGCACTCGGCGTGACGCGTTTCTTTAAAGAGAAATTCTTCACCCCAGTAGCGGAAGCTGCGACCAGCGGTCTGAAA TTCACCAAACTGCAACCGGCGCAAGAATTTTACGCTCCTGTTGGCACCACGCTGCTGGAGGCGCTGGAAAGCAATAACGT TCCGGTTGTCGCCGCCTGCCGCGCGGGTGTTTGCGGCTGCTGTAAGACGAAAGTGGTTTCCGGTGAATATACGGTGAGCA GTACAATGACGCTGACCGACGCCGAAATCGCTGAAGGTTACGTACTGGCCTGCTCCTGCCATCCGCAGGGGGATTTGGTT CTCGCATAA
Upstream 100 bases:
>100_bases CAGATCTGCTGGCGGTGCTGAACGAGAAATTCGGCCTGCGTTCTATCACCACTGTTGAAGAAGACATGAAGCAACTGTTG AGCGCGTAAGGAGTTTGTCG
Downstream 100 bases:
>100_bases TCGCCTTATGCCCGATGATATTCCTTTCATCGGGCTATTTAACCGTTAGTGCCTCCTTTCTCTCCCATCCCTTCCCCCTC CGTCAGATGAACTAAACTTG
Product: HCP oxidoreductase, NADH-dependent
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTMPTNQCPWRMQVHHIKQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGV GSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEW RNYPVTLVAENNVTEGFIAGRLTRELLTRVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLK FTKLQPAQEFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLV LA
Sequences:
>Translated_322_residues MTMPTNQCPWRMQVHHIKQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGV GSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEW RNYPVTLVAENNVTEGFIAGRLTRELLTRVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLK FTKLQPAQEFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLV LA >Mature_321_residues TMPTNQCPWRMQVHHIKQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVG SQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEWR NYPVTLVAENNVTEGFIAGRLTRELLTRVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLKF TKLQPAQEFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVL A
Specific function: NADH oxidoreductase acting in concert with HCP [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1787098, Length=322, Percent_Identity=98.7577639751553, Blast_Score=662, Evalue=0.0, Organism=Escherichia coli, GI1787658, Length=342, Percent_Identity=27.7777777777778, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788104, Length=289, Percent_Identity=27.681660899654, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35868; Mature: 35737
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPTNQCPWRMQVHHIKQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTIS CCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEC STPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAG CCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC CGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEWRNYPVTLVAENNVTEGFIAG CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCHHHHH RLTRELLTRVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLK HHHHHHHHHCCCHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCE FTKLQPAQEFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTD EEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCCEEEEEEEEEEC AEIAEGYVLACSCHPQGDLVLA HHHCCCEEEEEEECCCCCEEEC >Mature Secondary Structure TMPTNQCPWRMQVHHIKQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTIS CCCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEEC STPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAG CCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC CGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEWRNYPVTLVAENNVTEGFIAG CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCHHHHH RLTRELLTRVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLK HHHHHHHHHCCCHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCE FTKLQPAQEFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTD EEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCCEEEEEEEEEEC AEIAEGYVLACSCHPQGDLVLA HHHCCCEEEEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10651802 [H]