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The map label for this gene is ybgQ [H]

Identifier: 209399371

GI number: 209399371

Start: 829639

End: 832089

Strand: Reverse

Name: ybgQ [H]

Synonym: ECH74115_0808

Alternate gene names: 209399371

Gene position: 832089-829639 (Counterclockwise)

Preceding gene: 209400772

Following gene: 209398774

Centisome position: 14.93

GC content: 51.33

Gene sequence:

>2451_bases
GTGAATATTTATCGACTCTCTGTTCTTTCCTGTCTGGCAATGGTAACCCCTCCTGCGCTGACAGCTGAATTTAACCTTAA
CGTTCTCGATAAGTCGATTCGGGATAGCGTTGATATTTCGTTGCTCAATCAAAAAGGCGTCGTAGCTCCCGGCGATTACT
TTGTTAGTGTTACGGTTAATAATAATAAAATCAGTAATGGGCAACAAATTCGCTGGCAAAAATCTGGCGATAAAATTATT
CCTTGTATCAATGAATCGCTGATCGAACTCTTCGGACTTAAATCTGACTTTCGTAAAAAATTACCGGCAATAAAAGAATG
TGTCGATTTTAGTGTCTTCCCTGAAATCATCTTTACTTTCGATCAGGCAAATCAACAGCTCAATATTACAATCCCGCAGG
CATGGCTGGCGTGGCATTCAGAAAACTGGACGCCACCCTCAACGTGGAATAACGGTATTCCTGGCTTCCTGATGGATTAC
AACCTGTTTGCCAGCACTTATCGCCCACAAAGCGGCAGCAGCAGCAACAACCTGAACGCCTATGGCACCACGGGCCTCAA
CGCCGGGGCATGGCGTCTGCGCAGCGATTATCAGCTTAGCCAGTCCGATAGCGGCGACAACCGTGAACAATCTGGGGCGA
TTTCACGGACCTACCTGTTCCGCCCGTTACCGCAAATAGGTTCCCGATTAACCCTGGGCGAAACCGATTTTAGCTCTAAC
ATTTTTGATGGTTTCTCCTATACCGGTGCGGCGTTAGCCAGCGACGATCGAATGCTCCCCTGGGAGTTACGCGGCTACGC
GCCGCAAATCAGCGGCATCGCACAGACTAACGCCACGGTCACGATAAGCCATTCTGGTCGCGTGATTTACCAGAAAAAAG
TTCCACCAGGCCCATTTATTATTGATGACCTGAATCAGTCAGTGCAAGGTACACTGGATGTCAAAGTGAGCGAAGAAGAT
GGACGGGTGAATAACTTCCAGGTTTCAGCGGCCTCTACCCCGTTCCTGACGCGTCAGGGCCAGGTGCGCTATAAACTGGC
TGCCGGTCGCCCGCGTTCCTCTATGTCGCACCACACCGAGGATGAAACCTTCATTAGCCATGAAGTCTCCTGGGGAATGC
TCTCCAACACTTCACTATATGGCGGCATGCTTCTCGCAGGCGATGACTATCGTTCCGGCGCGCTGGGTATTGGGCAAAAT
ATGCTCTGGATGGGGGCGCTGTCGTTTGACGTGACCTGGGCCGACAGCCATTTTGATACCCAACAGGATGAGCAGGGTTA
CAGCTACCGCTTTAACTACAGCAAACAGGTTGATGCGACCAACAGCACCATCTCATTGGCAGCCTATCGCTTCTCCGATC
GCCATTTTCACAGCTACGCTAACTACATTGATCACAAATACAATGACGCCGACGCGCAGGATGAAAAGCAAACAATCAGC
CTCTCCTTCGGTCAGCCTATTACTCTGCTGAATCTTAATCTCTACGCCAACATCCTGCATCAGAGCTGGTGGAATGCGGA
TACCTCCACCACGGCCAACATTACCGTCGGTTTTAACGTCGACATTGGCGACTGGAAAGATATTTCTGTCTCGACCTCGT
TCAACACCACCCATTATGAAGATAAAGATCGCGACAACCAGATTTACTTTTCGATCTCCTTACCGATTGGGGAAAGTGGT
CGACTGGGTTATGACATGCAGAACAACAGTAATACTACCACCCACCGCATGTCGTGGAACGATACCCTGGATGAACGAAA
CAGTTGGGGAATGTCGGCTGGAATACAATCCGATCGCCCGGATAACGGTGCGCAGGTCAGCGGCAATTACCAACACCTCA
GTTCGGCGGGGGAATGGGATCTGACCGGAACCTATGCCGCCAATGATTACACTTCCGCCAGTGCCAGTTGGAGCGGCTCG
TTTACCGCGACTCAACATGGCGCGGCATTCCATCGCCGCAGTTCCACCAATGAACCACGCCTGATGGTCAGCACCGACGG
CGTGGGCGATATTCCGATTCAGGGCAATATTGACTACACCAACCGCTTTGGTATTGCCGTGGTACCGTTTGTTTCCAGCT
ACCAGCCTACGACGGTGGCGGTCAATATGAACGACTTGCCTGACGGCGTTACCGTTTCCGAAAACGTGGTGAAAGAAACC
TGGACCGAAGGCGCCATCGGCTTTAAATCGCTGGCGTCCCGCGCCGGGAAAGATCTCAACGTCATTATCAGCGATGCTAA
CGGGCATTTCCCGCCGCTCGGTGCCGATGTTCGCCAGGCTGAAGGCGGTGTCAGCGTCGGGATGGTTGGCGAAAACGGTC
ACGCATGGCTGAGTGGGGTCGATGAAAATCAACAATTTACCGTGCACTGGGGCGACCAGAAAACGTGTGCCATTCATCTG
CCGGAACATCTGGAAGATGTGACTAAGCGCCTGATTTTACCCTGTCATTAA

Upstream 100 bases:

>100_bases
GCCGTTACTGCTAACGCAACTTACGTTCTGGATTACCAATAATCCTTTTTAAGGCGGCTGATTAGCCGCCTTTTGCGAAT
ATTGTTCAGGTATGGATGCC

Downstream 100 bases:

>100_bases
TTAAGGAAAAGACGATGACATTTGTTAAAGGATTCCCTTTGATTCTTCTGGTTGCCAGTATGTGCAGCCACGGCGCAGTG
CAGCCTGACCGCACGCGCAT

Product: fimbrial usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MNIYRLSVLSCLAMVTPPALTAEFNLNVLDKSIRDSVDISLLNQKGVVAPGDYFVSVTVNNNKISNGQQIRWQKSGDKII
PCINESLIELFGLKSDFRKKLPAIKECVDFSVFPEIIFTFDQANQQLNITIPQAWLAWHSENWTPPSTWNNGIPGFLMDY
NLFASTYRPQSGSSSNNLNAYGTTGLNAGAWRLRSDYQLSQSDSGDNREQSGAISRTYLFRPLPQIGSRLTLGETDFSSN
IFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISHSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKVSEED
GRVNNFQVSAASTPFLTRQGQVRYKLAAGRPRSSMSHHTEDETFISHEVSWGMLSNTSLYGGMLLAGDDYRSGALGIGQN
MLWMGALSFDVTWADSHFDTQQDEQGYSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYIDHKYNDADAQDEKQTIS
LSFGQPITLLNLNLYANILHQSWWNADTSTTANITVGFNVDIGDWKDISVSTSFNTTHYEDKDRDNQIYFSISLPIGESG
RLGYDMQNNSNTTTHRMSWNDTLDERNSWGMSAGIQSDRPDNGAQVSGNYQHLSSAGEWDLTGTYAANDYTSASASWSGS
FTATQHGAAFHRRSSTNEPRLMVSTDGVGDIPIQGNIDYTNRFGIAVVPFVSSYQPTTVAVNMNDLPDGVTVSENVVKET
WTEGAIGFKSLASRAGKDLNVIISDANGHFPPLGADVRQAEGGVSVGMVGENGHAWLSGVDENQQFTVHWGDQKTCAIHL
PEHLEDVTKRLILPCH

Sequences:

>Translated_816_residues
MNIYRLSVLSCLAMVTPPALTAEFNLNVLDKSIRDSVDISLLNQKGVVAPGDYFVSVTVNNNKISNGQQIRWQKSGDKII
PCINESLIELFGLKSDFRKKLPAIKECVDFSVFPEIIFTFDQANQQLNITIPQAWLAWHSENWTPPSTWNNGIPGFLMDY
NLFASTYRPQSGSSSNNLNAYGTTGLNAGAWRLRSDYQLSQSDSGDNREQSGAISRTYLFRPLPQIGSRLTLGETDFSSN
IFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISHSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKVSEED
GRVNNFQVSAASTPFLTRQGQVRYKLAAGRPRSSMSHHTEDETFISHEVSWGMLSNTSLYGGMLLAGDDYRSGALGIGQN
MLWMGALSFDVTWADSHFDTQQDEQGYSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYIDHKYNDADAQDEKQTIS
LSFGQPITLLNLNLYANILHQSWWNADTSTTANITVGFNVDIGDWKDISVSTSFNTTHYEDKDRDNQIYFSISLPIGESG
RLGYDMQNNSNTTTHRMSWNDTLDERNSWGMSAGIQSDRPDNGAQVSGNYQHLSSAGEWDLTGTYAANDYTSASASWSGS
FTATQHGAAFHRRSSTNEPRLMVSTDGVGDIPIQGNIDYTNRFGIAVVPFVSSYQPTTVAVNMNDLPDGVTVSENVVKET
WTEGAIGFKSLASRAGKDLNVIISDANGHFPPLGADVRQAEGGVSVGMVGENGHAWLSGVDENQQFTVHWGDQKTCAIHL
PEHLEDVTKRLILPCH
>Mature_816_residues
MNIYRLSVLSCLAMVTPPALTAEFNLNVLDKSIRDSVDISLLNQKGVVAPGDYFVSVTVNNNKISNGQQIRWQKSGDKII
PCINESLIELFGLKSDFRKKLPAIKECVDFSVFPEIIFTFDQANQQLNITIPQAWLAWHSENWTPPSTWNNGIPGFLMDY
NLFASTYRPQSGSSSNNLNAYGTTGLNAGAWRLRSDYQLSQSDSGDNREQSGAISRTYLFRPLPQIGSRLTLGETDFSSN
IFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISHSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKVSEED
GRVNNFQVSAASTPFLTRQGQVRYKLAAGRPRSSMSHHTEDETFISHEVSWGMLSNTSLYGGMLLAGDDYRSGALGIGQN
MLWMGALSFDVTWADSHFDTQQDEQGYSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYIDHKYNDADAQDEKQTIS
LSFGQPITLLNLNLYANILHQSWWNADTSTTANITVGFNVDIGDWKDISVSTSFNTTHYEDKDRDNQIYFSISLPIGESG
RLGYDMQNNSNTTTHRMSWNDTLDERNSWGMSAGIQSDRPDNGAQVSGNYQHLSSAGEWDLTGTYAANDYTSASASWSGS
FTATQHGAAFHRRSSTNEPRLMVSTDGVGDIPIQGNIDYTNRFGIAVVPFVSSYQPTTVAVNMNDLPDGVTVSENVVKET
WTEGAIGFKSLASRAGKDLNVIISDANGHFPPLGADVRQAEGGVSVGMVGENGHAWLSGVDENQQFTVHWGDQKTCAIHL
PEHLEDVTKRLILPCH

Specific function: Could be involved in the export and assembly of the putative ybgD fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=816, Percent_Identity=83.2107843137255, Blast_Score=1403, Evalue=0.0,
Organism=Escherichia coli, GI1789533, Length=818, Percent_Identity=30.0733496332518, Blast_Score=296, Evalue=3e-81,
Organism=Escherichia coli, GI1790772, Length=866, Percent_Identity=28.5219399538106, Blast_Score=282, Evalue=6e-77,
Organism=Escherichia coli, GI1786332, Length=859, Percent_Identity=26.7753201396973, Blast_Score=259, Evalue=4e-70,
Organism=Escherichia coli, GI1786744, Length=782, Percent_Identity=28.6445012787724, Blast_Score=258, Evalue=8e-70,
Organism=Escherichia coli, GI1787172, Length=830, Percent_Identity=26.5060240963855, Blast_Score=251, Evalue=1e-67,
Organism=Escherichia coli, GI1788427, Length=811, Percent_Identity=26.0172626387176, Blast_Score=212, Evalue=7e-56,
Organism=Escherichia coli, GI1789610, Length=770, Percent_Identity=23.5064935064935, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 90177; Mature: 90177

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYRLSVLSCLAMVTPPALTAEFNLNVLDKSIRDSVDISLLNQKGVVAPGDYFVSVTVN
CCEEHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCEEEECCCCEECCCCEEEEEEEC
NNKISNGQQIRWQKSGDKIIPCINESLIELFGLKSDFRKKLPAIKECVDFSVFPEIIFTF
CCCCCCCCEEEEECCCCEEECHHHHHHHHHHCCCHHHHHHCHHHHHHHCHHHCHHHEEEE
DQANQQLNITIPQAWLAWHSENWTPPSTWNNGIPGFLMDYNLFASTYRPQSGSSSNNLNA
ECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCEEE
YGTTGLNAGAWRLRSDYQLSQSDSGDNREQSGAISRTYLFRPLPQIGSRLTLGETDFSSN
EECCCCCCCEEEECCCCEECCCCCCCCCHHCCCEEEEEEECCCHHHCCEEEECCCCCCCC
IFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISHSGRVIYQKKVPPGPFI
CCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCEEECCCEEEEECCCEEEEEECCCCCCEE
IDDLNQSVQGTLDVKVSEEDGRVNNFQVSAASTPFLTRQGQVRYKLAAGRPRSSMSHHTE
EECCCCCCCEEEEEEEECCCCCEEEEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCC
DETFISHEVSWGMLSNTSLYGGMLLAGDDYRSGALGIGQNMLWMGALSFDVTWADSHFDT
CCEEEEEECCCCEEECCCEECCEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCC
QQDEQGYSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYIDHKYNDADAQDEKQTIS
CCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEE
LSFGQPITLLNLNLYANILHQSWWNADTSTTANITVGFNVDIGDWKDISVSTSFNTTHYE
EECCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCC
DKDRDNQIYFSISLPIGESGRLGYDMQNNSNTTTHRMSWNDTLDERNSWGMSAGIQSDRP
CCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
DNGAQVSGNYQHLSSAGEWDLTGTYAANDYTSASASWSGSFTATQHGAAFHRRSSTNEPR
CCCCEECCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCE
LMVSTDGVGDIPIQGNIDYTNRFGIAVVPFVSSYQPTTVAVNMNDLPDGVTVSENVVKET
EEEEECCCCCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEECHHHHHHH
WTEGAIGFKSLASRAGKDLNVIISDANGHFPPLGADVRQAEGGVSVGMVGENGHAWLSGV
HCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEEECCCCCEEEEEC
DENQQFTVHWGDQKTCAIHLPEHLEDVTKRLILPCH
CCCCEEEEEECCCCEEEEECHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIYRLSVLSCLAMVTPPALTAEFNLNVLDKSIRDSVDISLLNQKGVVAPGDYFVSVTVN
CCEEHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCEEEECCCCEECCCCEEEEEEEC
NNKISNGQQIRWQKSGDKIIPCINESLIELFGLKSDFRKKLPAIKECVDFSVFPEIIFTF
CCCCCCCCEEEEECCCCEEECHHHHHHHHHHCCCHHHHHHCHHHHHHHCHHHCHHHEEEE
DQANQQLNITIPQAWLAWHSENWTPPSTWNNGIPGFLMDYNLFASTYRPQSGSSSNNLNA
ECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCEEE
YGTTGLNAGAWRLRSDYQLSQSDSGDNREQSGAISRTYLFRPLPQIGSRLTLGETDFSSN
EECCCCCCCEEEECCCCEECCCCCCCCCHHCCCEEEEEEECCCHHHCCEEEECCCCCCCC
IFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISHSGRVIYQKKVPPGPFI
CCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCEEECCCEEEEECCCEEEEEECCCCCCEE
IDDLNQSVQGTLDVKVSEEDGRVNNFQVSAASTPFLTRQGQVRYKLAAGRPRSSMSHHTE
EECCCCCCCEEEEEEEECCCCCEEEEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCC
DETFISHEVSWGMLSNTSLYGGMLLAGDDYRSGALGIGQNMLWMGALSFDVTWADSHFDT
CCEEEEEECCCCEEECCCEECCEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCC
QQDEQGYSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYIDHKYNDADAQDEKQTIS
CCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEE
LSFGQPITLLNLNLYANILHQSWWNADTSTTANITVGFNVDIGDWKDISVSTSFNTTHYE
EECCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCC
DKDRDNQIYFSISLPIGESGRLGYDMQNNSNTTTHRMSWNDTLDERNSWGMSAGIQSDRP
CCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
DNGAQVSGNYQHLSSAGEWDLTGTYAANDYTSASASWSGSFTATQHGAAFHRRSSTNEPR
CCCCEECCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCE
LMVSTDGVGDIPIQGNIDYTNRFGIAVVPFVSSYQPTTVAVNMNDLPDGVTVSENVVKET
EEEEECCCCCCCEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEECHHHHHHH
WTEGAIGFKSLASRAGKDLNVIISDANGHFPPLGADVRQAEGGVSVGMVGENGHAWLSGV
HCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEEECCCCCEEEEEC
DENQQFTVHWGDQKTCAIHLPEHLEDVTKRLILPCH
CCCCEEEEEECCCCEEEEECHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]