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The map label for this gene is ybgP [H]

Identifier: 209398774

GI number: 209398774

Start: 828893

End: 829624

Strand: Reverse

Name: ybgP [H]

Synonym: ECH74115_0807

Alternate gene names: 209398774

Gene position: 829624-828893 (Counterclockwise)

Preceding gene: 209399371

Following gene: 209399368

Centisome position: 14.89

GC content: 52.6

Gene sequence:

>732_bases
ATGACATTTGTTAAAGGATTCCCTTTGATTCTTCTGGTTGCCAGTATGTGCAGCCACGGCGCAGTGCAGCCTGACCGCAC
GCGCATCATCTTTAATAGCAAAGATAAAGCAACCAGCCTGCGCGTGGAAAACCGCAGCGATAAACTCCCCTACCTCGCCT
ATTCATGGATAGAAAATGAAAAGGGAGAGAAAAGCGATGAATTTCTCGTCGCCCTGCCGCCTATCCAGCGACTGGAGCCA
AAAGCGACTTCGCAGGTTCGGATCATGAAACAAGCCGCCACCGCGAAATTACCCACCGATCGCGAATCTCTCTTTTACTA
TAACCTGCGTGAAATTCCGCCTGTCCCGGAAGGCAGCGAGGGCCATGCGATCCTGCAAGTCGCCGTCCAAAGTCGCATTA
AGCTATTCTGGCGACCCGCCGCATTACGCAAAAAAATGGGCGATCATGTTGAGCAACAGCTACAGGTTAGCCAGCAGAAT
AACCAGCTTACCCTGAAAACCCCGACCGGATACTATCTGACTATTGCCTATCTTGGGCGGGATGAGAAAGGCGTGCTGCC
TGGCTTTAAAAGCACGATGGTCGCACCGTTCAGTTCGGTCACCACCAGCACGGGCAGCTATAGCGGCAAGCAGTTTTATC
TTGGCTACATGGACGACTACGGCGCATTGCGTATGAACACGCTCTCCTGCCAGCGGCAATGCCGCCTGCAGCCGGTGGAG
AATAAAAAATGA

Upstream 100 bases:

>100_bases
ACTGGGGCGACCAGAAAACGTGTGCCATTCATCTGCCGGAACATCTGGAAGATGTGACTAAGCGCCTGATTTTACCCTGT
CATTAATTAAGGAAAAGACG

Downstream 100 bases:

>100_bases
GATTCGCCAAAGGCGTGTTGCTCGCCATCTGTCTGATTTTTTTGCCGCTAAAAGCGGCGCTGGCGCTGAACTGCTATTTT
GGTACCGCAAACGGCGCTGT

Product: periplasmic pilus chaperone family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTFVKGFPLILLVASMCSHGAVQPDRTRIIFNSKDKATSLRVENRSDKLPYLAYSWIENEKGEKSDEFLVALPPIQRLEP
KATSQVRIMKQAATAKLPTDRESLFYYNLREIPPVPEGSEGHAILQVAVQSRIKLFWRPAALRKKMGDHVEQQLQVSQQN
NQLTLKTPTGYYLTIAYLGRDEKGVLPGFKSTMVAPFSSVTTSTGSYSGKQFYLGYMDDYGALRMNTLSCQRQCRLQPVE
NKK

Sequences:

>Translated_243_residues
MTFVKGFPLILLVASMCSHGAVQPDRTRIIFNSKDKATSLRVENRSDKLPYLAYSWIENEKGEKSDEFLVALPPIQRLEP
KATSQVRIMKQAATAKLPTDRESLFYYNLREIPPVPEGSEGHAILQVAVQSRIKLFWRPAALRKKMGDHVEQQLQVSQQN
NQLTLKTPTGYYLTIAYLGRDEKGVLPGFKSTMVAPFSSVTTSTGSYSGKQFYLGYMDDYGALRMNTLSCQRQCRLQPVE
NKK
>Mature_242_residues
TFVKGFPLILLVASMCSHGAVQPDRTRIIFNSKDKATSLRVENRSDKLPYLAYSWIENEKGEKSDEFLVALPPIQRLEPK
ATSQVRIMKQAATAKLPTDRESLFYYNLREIPPVPEGSEGHAILQVAVQSRIKLFWRPAALRKKMGDHVEQQLQVSQQNN
QLTLKTPTGYYLTIAYLGRDEKGVLPGFKSTMVAPFSSVTTSTGSYSGKQFYLGYMDDYGALRMNTLSCQRQCRLQPVEN
KK

Specific function: Could be required for the biogenesis of the putative ybgD fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1786936, Length=242, Percent_Identity=78.5123966942149, Blast_Score=409, Evalue=1e-115,
Organism=Escherichia coli, GI87082203, Length=224, Percent_Identity=38.3928571428571, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1788677, Length=217, Percent_Identity=40.5529953917051, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1790771, Length=226, Percent_Identity=32.7433628318584, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1789532, Length=224, Percent_Identity=32.1428571428571, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787171, Length=206, Percent_Identity=32.5242718446602, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1786333, Length=215, Percent_Identity=31.1627906976744, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1788428, Length=224, Percent_Identity=29.4642857142857, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786743, Length=232, Percent_Identity=32.3275862068966, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 27488; Mature: 27357

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFVKGFPLILLVASMCSHGAVQPDRTRIIFNSKDKATSLRVENRSDKLPYLAYSWIENE
CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCC
KGEKSDEFLVALPPIQRLEPKATSQVRIMKQAATAKLPTDRESLFYYNLREIPPVPEGSE
CCCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCC
GHAILQVAVQSRIKLFWRPAALRKKMGDHVEQQLQVSQQNNQLTLKTPTGYYLTIAYLGR
CCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECC
DEKGVLPGFKSTMVAPFSSVTTSTGSYSGKQFYLGYMDDYGALRMNTLSCQRQCRLQPVE
CCCCCCCCCHHHHCCCCHHHCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHCCCCCCC
NKK
CCC
>Mature Secondary Structure 
TFVKGFPLILLVASMCSHGAVQPDRTRIIFNSKDKATSLRVENRSDKLPYLAYSWIENE
CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCC
KGEKSDEFLVALPPIQRLEPKATSQVRIMKQAATAKLPTDRESLFYYNLREIPPVPEGSE
CCCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCC
GHAILQVAVQSRIKLFWRPAALRKKMGDHVEQQLQVSQQNNQLTLKTPTGYYLTIAYLGR
CCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECC
DEKGVLPGFKSTMVAPFSSVTTSTGSYSGKQFYLGYMDDYGALRMNTLSCQRQCRLQPVE
CCCCCCCCCHHHHCCCCHHHCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHCCCCCCC
NKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]