| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209398744
Identifier: 209398744
GI number: 209398744
Start: 4706592
End: 4707098
Strand: Reverse
Name: 209398744
Synonym: ECH74115_5059
Alternate gene names: NA
Gene position: 4707098-4706592 (Counterclockwise)
Preceding gene: 209400927
Following gene: 209397062
Centisome position: 84.48
GC content: 40.63
Gene sequence:
>507_bases ATGTCGTTATCAGGAGCGGTATTCAAGACATTTCTGACAAGTGAACATGCGTCATGGAACAGGTTCAACAGAAGGCTTCA TATACCCAATGAAGATATCGTAGATGAAATTCAGCTTAAAGCCCGAATGCAACAACGCCATCATCGGGTATATCCAGAAA TAGGGGATTCCACCATTGTCTCTTTTAGAGGCAAAGACTATGCTGTTCACTTTATTAAAGATGGCCCAAAAGATGATTAT GTGTACAAAGTACAAAGAATAACACCGGAAAATGGATGTTTCTCAACGCTATTTAGCGTGTTTTCTGGCGGTGTGACTAA GGCTTTGGAAAGAAAATTAAATGAGAGACATATAACTCCACTTTCTTCAACCTGGTTTCCTCGTACTCCCCTGGAGGGGA TCTTAGCTGAAAGAGGATTATCTTCTTTGTTACGTCGTGTACAGTCTACCGAACGTCTTGATAATAGGGCTATAGCAACA AGAGCTTCCTCTTATAGCGTATTATGA
Upstream 100 bases:
>100_bases GATAGCATACGGGAGTATTGTAAAAATCAACGAAGATTTTTATTTTACTGTTAGCATAGTATGTGATTAATCAGGAATAC GTTATATAGGGAGATGTATC
Downstream 100 bases:
>100_bases TTAGCATTTGAGTTTTCTTCCTGACTTAACTCCAGAATAGTTATAATTCTGGAGTTTTTCCGCTTTTTAACTGATATTAC ATTGCTTTTAGATAATACAG
Product: hypothetical protein
Products: NA
Alternate protein names: T3SS Effector Protein EspH
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSLSGAVFKTFLTSEHASWNRFNRRLHIPNEDIVDEIQLKARMQQRHHRVYPEIGDSTIVSFRGKDYAVHFIKDGPKDDY VYKVQRITPENGCFSTLFSVFSGGVTKALERKLNERHITPLSSTWFPRTPLEGILAERGLSSLLRRVQSTERLDNRAIAT RASSYSVL
Sequences:
>Translated_168_residues MSLSGAVFKTFLTSEHASWNRFNRRLHIPNEDIVDEIQLKARMQQRHHRVYPEIGDSTIVSFRGKDYAVHFIKDGPKDDY VYKVQRITPENGCFSTLFSVFSGGVTKALERKLNERHITPLSSTWFPRTPLEGILAERGLSSLLRRVQSTERLDNRAIAT RASSYSVL >Mature_167_residues SLSGAVFKTFLTSEHASWNRFNRRLHIPNEDIVDEIQLKARMQQRHHRVYPEIGDSTIVSFRGKDYAVHFIKDGPKDDYV YKVQRITPENGCFSTLFSVFSGGVTKALERKLNERHITPLSSTWFPRTPLEGILAERGLSSLLRRVQSTERLDNRAIATR ASSYSVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19282; Mature: 19151
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSGAVFKTFLTSEHASWNRFNRRLHIPNEDIVDEIQLKARMQQRHHRVYPEIGDSTIV CCCCHHHHHHHHHHCCCCHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE SFRGKDYAVHFIKDGPKDDYVYKVQRITPENGCFSTLFSVFSGGVTKALERKLNERHITP EECCCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC LSSTWFPRTPLEGILAERGLSSLLRRVQSTERLDNRAIATRASSYSVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLSGAVFKTFLTSEHASWNRFNRRLHIPNEDIVDEIQLKARMQQRHHRVYPEIGDSTIV CCCHHHHHHHHHHCCCCHHHHCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE SFRGKDYAVHFIKDGPKDDYVYKVQRITPENGCFSTLFSVFSGGVTKALERKLNERHITP EECCCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC LSSTWFPRTPLEGILAERGLSSLLRRVQSTERLDNRAIATRASSYSVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA