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The map label for this gene is 209400927

Identifier: 209400927

GI number: 209400927

Start: 4707129

End: 4708046

Strand: Reverse

Name: 209400927

Synonym: ECH74115_5060

Alternate gene names: NA

Gene position: 4708046-4707129 (Counterclockwise)

Preceding gene: 209400182

Following gene: 209398744

Centisome position: 84.49

GC content: 37.47

Gene sequence:

>918_bases
ATGAAGCCATTGAGTTCACAATTGAATATGAAAATTAACGATTTTTATTTGCCGTTGTTGCCAGTTATCGGAACCGGTCG
CCTCTATATTACGTCCAAAGGTCATGCTTGCCATGCATATTTTCGTGAGGTCAGCGGTCATGGTATTCGTTTCACGTTGA
CATACTCGGGCTATGAGGGGCGTTTCTGGATATCAGAAGAACAGTTCATTCAGTGGTGCCAAGAGTTATTCCCGTATAGC
GAAAGCCGGCTGATACCGGAAGATACGATAAAACTCATGATCTTATGGGTAATGCAGACTGCCTTACCGGAAGGTGATGT
GTCAGTTGATGATGTTCAATTTACGATGCTAAATAAAGATATTTATCCGGTAATAGAAAATAATAATGGAGAAAACAGAC
TTAATGTAATTATACTCGAAACAACGGTACAAAGTTTACAATATCTGATTAATGATAATTGGCAATTAGTTCCACATTCT
AATGCTCTTTTTTTTGATGGCTATATCGTACCTGGGTGGACTGATTATCCAGTTACAGAGTTGAGAGTTGGTGATAGTCT
GAGACTCTATCATGTTGATGATAGTCAAGAGAGAAGGTGCTGGATTGTTATTAATACCCCTTTAGCAACAGTAAATCTGA
GTGATAATAATTTATCTGTCACGGATGTTCTGGCTGCGGATCTGTTATCTGCTCTTAGCAATGAGACTGTCATGAATCGC
ATTTATTGTGCGATCGGTACAGTCCATATTGATATACACATGTTGCGTAATGTTAAAAAAGATGACATTATTAATTCAGA
TGGATACCATCTTTTTGGTGGTTGTCAGTTAATACGCAATAATACGACGATAGCATACGGGAGTATTGTAAAAATCAACG
AAGATTTTTATTTTACTGTTAGCATAGTATGTGATTAA

Upstream 100 bases:

>100_bases
ATTTATCTGTCTATTAAAGTAAGCCCAAATAATAGAAATCATGTTTTTTTATATCATAAAAAAGACTATGTTTTCGATAA
GTTAAAAGAAATCTTTCCTG

Downstream 100 bases:

>100_bases
TCAGGAATACGTTATATAGGGAGATGTATCATGTCGTTATCAGGAGCGGTATTCAAGACATTTCTGACAAGTGAACATGC
GTCATGGAACAGGTTCAACA

Product: SepQ

Products: NA

Alternate protein names: T3SS Protein SepQ

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEGRFWISEEQFIQWCQELFPYS
ESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKDIYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHS
NALFFDGYIVPGWTDYPVTELRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVLAADLLSALSNETVMNR
IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTVSIVCD

Sequences:

>Translated_305_residues
MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEGRFWISEEQFIQWCQELFPYS
ESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKDIYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHS
NALFFDGYIVPGWTDYPVTELRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVLAADLLSALSNETVMNR
IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTVSIVCD
>Mature_305_residues
MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEGRFWISEEQFIQWCQELFPYS
ESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKDIYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHS
NALFFDGYIVPGWTDYPVTELRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVLAADLLSALSNETVMNR
IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTVSIVCD

Specific function: Unknown

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34893; Mature: 34893

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEG
CCCCCCCCCEEEEEEEEEEEHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCC
RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD
EEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECEEEEEEECCC
IYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHSNALFFDGYIVPGWTDYPVTE
EEEEEECCCCCCEEEEEEEEHHHHHHHHHHCCCEEEEECCCEEEECCEECCCCCCCCCEE
LRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVLAADLLSALSNETVMNR
EEECCCEEEEECCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHE
IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTV
EEEEEEEEEEEEEHHHCCCHHCCCCCCCCEEEEEEEEEECCCEEEEEEEEEECCCEEEEE
SIVCD
EEEEC
>Mature Secondary Structure
MKPLSSQLNMKINDFYLPLLPVIGTGRLYITSKGHACHAYFREVSGHGIRFTLTYSGYEG
CCCCCCCCCEEEEEEEEEEEHHCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCC
RFWISEEQFIQWCQELFPYSESRLIPEDTIKLMILWVMQTALPEGDVSVDDVQFTMLNKD
EEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECEEEEEEECCC
IYPVIENNNGENRLNVIILETTVQSLQYLINDNWQLVPHSNALFFDGYIVPGWTDYPVTE
EEEEEECCCCCCEEEEEEEEHHHHHHHHHHCCCEEEEECCCEEEECCEECCCCCCCCCEE
LRVGDSLRLYHVDDSQERRCWIVINTPLATVNLSDNNLSVTDVLAADLLSALSNETVMNR
EEECCCEEEEECCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHE
IYCAIGTVHIDIHMLRNVKKDDIINSDGYHLFGGCQLIRNNTTIAYGSIVKINEDFYFTV
EEEEEEEEEEEEEHHHCCCHHCCCCCCCCEEEEEEEEEECCCEEEEEEEEEECCCEEEEE
SIVCD
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA