Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209398029
Identifier: 209398029
GI number: 209398029
Start: 23330
End: 24751
Strand: Reverse
Name: 209398029
Synonym: ECH74115_0025
Alternate gene names: NA
Gene position: 24751-23330 (Counterclockwise)
Preceding gene: 209399727
Following gene: 209396234
Centisome position: 0.44
GC content: 32.28
Gene sequence:
>1422_bases ATGACAGATGGTATCTCAACTTCGCCACATTGTCTTTATAAATCAAATATAGTAGATGATGTAATAATAAATAAAACAAG ACAAAATGAGTTAGTAAAAGTGTTTTGCGAGTATAAAACAGAGTTCTTAATTTTGTTTGATGACTTTTTCAGAAGCCAGG ATTTGCCTAAACCATCTCCAGTCCTCCATCATTTTTTTCAATATACTCATCTGAGAGATGCACATTTTTATAGATGTAAA CTCATAGAACATACAGTTCAATTTTCTTTTTTTAAACACAAAGGCATCACATTACTTAGATTGGATGTTTTTGATGACAG AACAAGCGAATGTCTTTCTGAAGAGATTAAGATATATCAAGAATGCCATGAAAAATTTATTAAATTTTTAAAGGCAAACT TCAATCAGGAAATATACCCAGAGCTATACACTCCTGAAATATTTTATGAGGCCTGCAGAAATCTCCAGTCATTTTATGAT CATCAGGAGACGTCACAAAACGCTAAGTACAGTGCAATAGTCAAGAAAAAAAGTTATTTTAATAAGGAAATCAGAAATCT AATAAAAAAGAATATTTATCCTGAGCTATACAATGAGCAATGCAATAAAATCCCCGCCTCATCGACAGATGATAACCAGA AAATAACATGGCAGAATTTTAAAACTAGCAATGCGGCATATTCACAACTATGTGAAAAATTATCTTTATTAAAAAGCTCG CCCAGTCGGTTAATAGAGAAATCAGCTTACTGCTCAAATGAAAACATGATCACCGATAAATTTGATGTTGTCTTTTCTTA CTGCGGAGATAATGTAAAGGAATTTATACTTTTATTACCCTATAATAAATCGCTGGAGATGCATGAACTTAACGAGCAAA ACATCCAGTATTTGACTGCCCTTAATATTAATATACATAAACTGTTGCTATCAAATATAACAATAGAAAAGAGCAACCTT TCATATGGGTATTATTTTGGTTGTGTATTATCCAATATATCATGTTTTGAAAGCGACTTATCAAACACCATCTTTTCAAA TGGAGAAATAAACAACCTCTTCATTAAAAAAAGCAACATATTTGGAACATCGTTCACTAATACCATGATAAAAAATTTGC GCTGTGAAGATATTATGCCTGGCCGATGGACCACTCAACTTGTCAATAAGCACTTAGGTTACAGATACACAGGAGTATTC AAAACCCTGGCAAGTATTGATGACAAACCGTCCCGTTTCGAAATTTTGATACCATTGGTACAAACTTTAGTTCGCGACAA TGTAAAGCTAAATAATGATGTGTATAAAGAACTGAAAAAGTTTATGCACGATTACGACAAAACATCCCCAGAAATGAGAA AATACCTTCAGAGCATCAACGAGTCTATGTTCCTTATGAAAAAAATATCTCATCAAGATTAA
Upstream 100 bases:
>100_bases TTTATATTGTACTTCTTAAAATTAATGAGCGATTTTTGATAGTAGTCACATTCACTCATAAATTAAATTAATAAAAATTC ATCAACTTCAAGGACTGATA
Downstream 100 bases:
>100_bases AACACCCCAAAAAAGAAGTAATTTCAGAATGAAATTACCTGTGATAATTATTAATTAACTGCAGAGAAATAAAAAATAAT CTGAAGCATGCTCTGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MTDGISTSPHCLYKSNIVDDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQDLPKPSPVLHHFFQYTHLRDAHFYRCK LIEHTVQFSFFKHKGITLLRLDVFDDRTSECLSEEIKIYQECHEKFIKFLKANFNQEIYPELYTPEIFYEACRNLQSFYD HQETSQNAKYSAIVKKKSYFNKEIRNLIKKNIYPELYNEQCNKIPASSTDDNQKITWQNFKTSNAAYSQLCEKLSLLKSS PSRLIEKSAYCSNENMITDKFDVVFSYCGDNVKEFILLLPYNKSLEMHELNEQNIQYLTALNINIHKLLLSNITIEKSNL SYGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNIFGTSFTNTMIKNLRCEDIMPGRWTTQLVNKHLGYRYTGVF KTLASIDDKPSRFEILIPLVQTLVRDNVKLNNDVYKELKKFMHDYDKTSPEMRKYLQSINESMFLMKKISHQD
Sequences:
>Translated_473_residues MTDGISTSPHCLYKSNIVDDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQDLPKPSPVLHHFFQYTHLRDAHFYRCK LIEHTVQFSFFKHKGITLLRLDVFDDRTSECLSEEIKIYQECHEKFIKFLKANFNQEIYPELYTPEIFYEACRNLQSFYD HQETSQNAKYSAIVKKKSYFNKEIRNLIKKNIYPELYNEQCNKIPASSTDDNQKITWQNFKTSNAAYSQLCEKLSLLKSS PSRLIEKSAYCSNENMITDKFDVVFSYCGDNVKEFILLLPYNKSLEMHELNEQNIQYLTALNINIHKLLLSNITIEKSNL SYGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNIFGTSFTNTMIKNLRCEDIMPGRWTTQLVNKHLGYRYTGVF KTLASIDDKPSRFEILIPLVQTLVRDNVKLNNDVYKELKKFMHDYDKTSPEMRKYLQSINESMFLMKKISHQD >Mature_472_residues TDGISTSPHCLYKSNIVDDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQDLPKPSPVLHHFFQYTHLRDAHFYRCKL IEHTVQFSFFKHKGITLLRLDVFDDRTSECLSEEIKIYQECHEKFIKFLKANFNQEIYPELYTPEIFYEACRNLQSFYDH QETSQNAKYSAIVKKKSYFNKEIRNLIKKNIYPELYNEQCNKIPASSTDDNQKITWQNFKTSNAAYSQLCEKLSLLKSSP SRLIEKSAYCSNENMITDKFDVVFSYCGDNVKEFILLLPYNKSLEMHELNEQNIQYLTALNINIHKLLLSNITIEKSNLS YGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNIFGTSFTNTMIKNLRCEDIMPGRWTTQLVNKHLGYRYTGVFK TLASIDDKPSRFEILIPLVQTLVRDNVKLNNDVYKELKKFMHDYDKTSPEMRKYLQSINESMFLMKKISHQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55773; Mature: 55642
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGISTSPHCLYKSNIVDDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQDLPKPSP CCCCCCCCCCEEECCCCHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCH VLHHFFQYTHLRDAHFYRCKLIEHTVQFSFFKHKGITLLRLDVFDDRTSECLSEEIKIYQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH ECHEKFIKFLKANFNQEIYPELYTPEIFYEACRNLQSFYDHQETSQNAKYSAIVKKKSYF HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NKEIRNLIKKNIYPELYNEQCNKIPASSTDDNQKITWQNFKTSNAAYSQLCEKLSLLKSS HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC PSRLIEKSAYCSNENMITDKFDVVFSYCGDNVKEFILLLPYNKSLEMHELNEQNIQYLTA HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCHHHCCCCCCEEEEE LNINIHKLLLSNITIEKSNLSYGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNI ECCHHHHHHHHHCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCC FGTSFTNTMIKNLRCEDIMPGRWTTQLVNKHLGYRYTGVFKTLASIDDKPSRFEILIPLV CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH QTLVRDNVKLNNDVYKELKKFMHDYDKTSPEMRKYLQSINESMFLMKKISHQD HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDGISTSPHCLYKSNIVDDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQDLPKPSP CCCCCCCCCEEECCCCHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCH VLHHFFQYTHLRDAHFYRCKLIEHTVQFSFFKHKGITLLRLDVFDDRTSECLSEEIKIYQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH ECHEKFIKFLKANFNQEIYPELYTPEIFYEACRNLQSFYDHQETSQNAKYSAIVKKKSYF HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NKEIRNLIKKNIYPELYNEQCNKIPASSTDDNQKITWQNFKTSNAAYSQLCEKLSLLKSS HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC PSRLIEKSAYCSNENMITDKFDVVFSYCGDNVKEFILLLPYNKSLEMHELNEQNIQYLTA HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCHHHCCCCCCEEEEE LNINIHKLLLSNITIEKSNLSYGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNI ECCHHHHHHHHHCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCC FGTSFTNTMIKNLRCEDIMPGRWTTQLVNKHLGYRYTGVFKTLASIDDKPSRFEILIPLV CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH QTLVRDNVKLNNDVYKELKKFMHDYDKTSPEMRKYLQSINESMFLMKKISHQD HHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA