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The map label for this gene is yehD [C]

Identifier: 209396234

GI number: 209396234

Start: 22495

End: 23028

Strand: Reverse

Name: yehD [C]

Synonym: ECH74115_0024

Alternate gene names: 209396234

Gene position: 23028-22495 (Counterclockwise)

Preceding gene: 209398029

Following gene: 209397389

Centisome position: 0.41

GC content: 39.14

Gene sequence:

>534_bases
ATGAAAAAGTATATTATTCCCTTCGTTGCGACAACGTTGATGTTTAGCGCAACAACCTTCGCCAAGGATGTCGATCAAGG
AACACTAACCATTAGAGGAGAAGTTGTTGATACAACGTGTTACTTTGTTAATGGTGATTCGACAACAGATATCGTTGTCG
AAGATGTTGTAACCAGTGCAATGAATCAACTTATCAATAATGAAATCTATACTTTAAAAACCGGTTCAACCTCTCATGAC
TTAGAAATTCAGTGTGACGGAAATACAGCCCCAAGTATCGAAGTACTAGCATCAGAGTTTGATGCTAATAACTTTACGCT
GAATAAAGGAACTGCTGAGAACATTGGCTTTGCCATTTTCCTCGATGATGGGACTTTGACCAGAATGAGACCAGGGTTAA
AAACACCGCTGAAAGATAATGGCTCTGGTCAATATTTTCTCAATTTAAATGCACAATATGCCCGCACAAGTGGCAATCCT
GTTACAAAAGGCTCCGTAGAGTCAACCGTAACGATTAAAATCAGTGCAGATTAA

Upstream 100 bases:

>100_bases
AATTAAAAAATTTAAACATTAATCTAAATAATAACAACCTGATCACATAATCGGGTTTGAAAACGAGTGACCTTCCATAC
CAGTTAATTAAGGATGATTT

Downstream 100 bases:

>100_bases
CGTTTTTTGCCGGTAGCTCTGCTACCGGTATTATTTACGGAGTGATTACGTGAGAATAATAACAGCATTACTGATGTCAT
TTTTTATTTTACCTGTTCAT

Product: putative fimbrial protein

Products: NA

Alternate protein names: Fimbrial Subunit; Fimbrial-Like Protein; Paral Fimbrial-Like Protein; Fimbrial Protein

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKKYIIPFVATTLMFSATTFAKDVDQGTLTIRGEVVDTTCYFVNGDSTTDIVVEDVVTSAMNQLINNEIYTLKTGSTSHD
LEIQCDGNTAPSIEVLASEFDANNFTLNKGTAENIGFAIFLDDGTLTRMRPGLKTPLKDNGSGQYFLNLNAQYARTSGNP
VTKGSVESTVTIKISAD

Sequences:

>Translated_177_residues
MKKYIIPFVATTLMFSATTFAKDVDQGTLTIRGEVVDTTCYFVNGDSTTDIVVEDVVTSAMNQLINNEIYTLKTGSTSHD
LEIQCDGNTAPSIEVLASEFDANNFTLNKGTAENIGFAIFLDDGTLTRMRPGLKTPLKDNGSGQYFLNLNAQYARTSGNP
VTKGSVESTVTIKISAD
>Mature_177_residues
MKKYIIPFVATTLMFSATTFAKDVDQGTLTIRGEVVDTTCYFVNGDSTTDIVVEDVVTSAMNQLINNEIYTLKTGSTSHD
LEIQCDGNTAPSIEVLASEFDANNFTLNKGTAENIGFAIFLDDGTLTRMRPGLKTPLKDNGSGQYFLNLNAQYARTSGNP
VTKGSVESTVTIKISAD

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788429, Length=180, Percent_Identity=26.6666666666667, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19128; Mature: 19128

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYIIPFVATTLMFSATTFAKDVDQGTLTIRGEVVDTTCYFVNGDSTTDIVVEDVVTSA
CCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCEEHHHHHHHHH
MNQLINNEIYTLKTGSTSHDLEIQCDGNTAPSIEVLASEFDANNFTLNKGTAENIGFAIF
HHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEE
LDDGTLTRMRPGLKTPLKDNGSGQYFLNLNAQYARTSGNPVTKGSVESTVTIKISAD
ECCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKKYIIPFVATTLMFSATTFAKDVDQGTLTIRGEVVDTTCYFVNGDSTTDIVVEDVVTSA
CCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCEEHHHHHHHHH
MNQLINNEIYTLKTGSTSHDLEIQCDGNTAPSIEVLASEFDANNFTLNKGTAENIGFAIF
HHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEECCCCCCCCEEEEE
LDDGTLTRMRPGLKTPLKDNGSGQYFLNLNAQYARTSGNPVTKGSVESTVTIKISAD
ECCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA