Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is ydjH [C]
Identifier: 209396508
GI number: 209396508
Start: 5235478
End: 5236479
Strand: Reverse
Name: ydjH [C]
Synonym: ECH74115_5595
Alternate gene names: 209396508
Gene position: 5236479-5235478 (Counterclockwise)
Preceding gene: 209396544
Following gene: 209395750
Centisome position: 93.98
GC content: 57.68
Gene sequence:
>1002_bases ATGATGGAGCGTAAAGGGATTATCGCCGCAGGCAATATGTTGGTTGACCACGTCCATCAGATTATCCAGTGGCCAGAGCG CGGCTGGCTGGCGGAGATCACCCACAGCGAACGCTCCACCGGCGGTGCGCCGCTTAACGTCCTGCTGACGCTGGCGAAAA TGCGCACCGGGCTGCCGTTACAGGCGGTTGGGCTAATCGGTCAGGACAGCGACGGCGATTACATCATGGCGATGCTTGAG CAATATCACGTCAATCGTCAGCATGTGCAGCGCACTACCTTTGCCCCGACGTCGATGTCGCAGGTGATGACAGACCCAAG CGGGCAGCGGACGTTTTTCCATTCGCCGGGTGCAAACAGACTTTTGGATCTTCCGGCGTTCGATCAGCTCGATAACACCA TGAAGATTTTCCATCTCGGCTATTTACTGTTGCTCGACAGCCTGGATATGCCGGACGATGTTTACGGCACCCGTAGCGCA CGCCTGCTGGCGCAAATGCGTGATACTGGCTTTGAAACCTCACTCGACCTGGTCTCCCGTAAGGGCGATCCGCGTTATCA GCCGCTGGTGCTGCCCGCGTTGCGCCATCTGGATTATCTGGTAATTAACGAACTGGAGGCCGGGGAGTTTAGCGGGCTGG AAATTCGGTTACCCAACGGCGAACCGCATATCACGCATATTGCTGCCGCCGCGCGTGAACTGTTAGATGCGGGCGTGCGC CAGCGGGTGGTGATCCACTACCCGGAAGGGGCGTGGGGAGAGACCCCAGAACAGGGCGGCGTGTGGATCCCTTCGCAAAA GTTAGAACAACGGGAAATTATCGGCAGCGTCGGCGCGGGCGATGCATTTTGTGCCGGATTTTTATATGGCTGCCATGAAC GCTGGACGCTTACCGAGAGCATCAAACTGGCACACGCCTGCGCGCGGGCAAGCCTGTTATGCGCCAATGCCATCGACGGG GCGAAAACGCTGGAAGAGCTGCAAACAGAAATGTCGGATTAA
Upstream 100 bases:
>100_bases CGATGTATGACGAGTTTGCCGAGTTACTGCTGGCAGTGGAAGCCGCCATCAGCGATACGGTTGCACAACAGATGCGTATT TTTGGCAGTGCGGGGCAGGC
Downstream 100 bases:
>100_bases TGCACGTCGGCAGCGAAGACATACCCCAGACCGCGCAGAGTTTTAATCAACATCGGCTGATGCGGGTTGAGTTCGATTTT GCGTCGTAAGCGCATGATTA
Product: PfkB domain protein
Products: NA
Alternate protein names: PfkB Domain Protein; Sugar Kinase; PfkB Domain-Containing Protein; Kinase; Fructokinasd; PfkB Family Carbohydrate Kinase; Myo-Inositol Catabolism; PfkB Family Sugar Kinase; Kinase PfkB Family
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MMERKGIIAAGNMLVDHVHQIIQWPERGWLAEITHSERSTGGAPLNVLLTLAKMRTGLPLQAVGLIGQDSDGDYIMAMLE QYHVNRQHVQRTTFAPTSMSQVMTDPSGQRTFFHSPGANRLLDLPAFDQLDNTMKIFHLGYLLLLDSLDMPDDVYGTRSA RLLAQMRDTGFETSLDLVSRKGDPRYQPLVLPALRHLDYLVINELEAGEFSGLEIRLPNGEPHITHIAAAARELLDAGVR QRVVIHYPEGAWGETPEQGGVWIPSQKLEQREIIGSVGAGDAFCAGFLYGCHERWTLTESIKLAHACARASLLCANAIDG AKTLEELQTEMSD
Sequences:
>Translated_333_residues MMERKGIIAAGNMLVDHVHQIIQWPERGWLAEITHSERSTGGAPLNVLLTLAKMRTGLPLQAVGLIGQDSDGDYIMAMLE QYHVNRQHVQRTTFAPTSMSQVMTDPSGQRTFFHSPGANRLLDLPAFDQLDNTMKIFHLGYLLLLDSLDMPDDVYGTRSA RLLAQMRDTGFETSLDLVSRKGDPRYQPLVLPALRHLDYLVINELEAGEFSGLEIRLPNGEPHITHIAAAARELLDAGVR QRVVIHYPEGAWGETPEQGGVWIPSQKLEQREIIGSVGAGDAFCAGFLYGCHERWTLTESIKLAHACARASLLCANAIDG AKTLEELQTEMSD >Mature_333_residues MMERKGIIAAGNMLVDHVHQIIQWPERGWLAEITHSERSTGGAPLNVLLTLAKMRTGLPLQAVGLIGQDSDGDYIMAMLE QYHVNRQHVQRTTFAPTSMSQVMTDPSGQRTFFHSPGANRLLDLPAFDQLDNTMKIFHLGYLLLLDSLDMPDDVYGTRSA RLLAQMRDTGFETSLDLVSRKGDPRYQPLVLPALRHLDYLVINELEAGEFSGLEIRLPNGEPHITHIAAAARELLDAGVR QRVVIHYPEGAWGETPEQGGVWIPSQKLEQREIIGSVGAGDAFCAGFLYGCHERWTLTESIKLAHACARASLLCANAIDG AKTLEELQTEMSD
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36878; Mature: 36878
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMERKGIIAAGNMLVDHVHQIIQWPERGWLAEITHSERSTGGAPLNVLLTLAKMRTGLPL CCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCE QAVGLIGQDSDGDYIMAMLEQYHVNRQHVQRTTFAPTSMSQVMTDPSGQRTFFHSPGANR EEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCCC LLDLPAFDQLDNTMKIFHLGYLLLLDSLDMPDDVYGTRSARLLAQMRDTGFETSLDLVSR EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHC KGDPRYQPLVLPALRHLDYLVINELEAGEFSGLEIRLPNGEPHITHIAAAARELLDAGVR CCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC QRVVIHYPEGAWGETPEQGGVWIPSQKLEQREIIGSVGAGDAFCAGFLYGCHERWTLTES CCEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH IKLAHACARASLLCANAIDGAKTLEELQTEMSD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MMERKGIIAAGNMLVDHVHQIIQWPERGWLAEITHSERSTGGAPLNVLLTLAKMRTGLPL CCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCE QAVGLIGQDSDGDYIMAMLEQYHVNRQHVQRTTFAPTSMSQVMTDPSGQRTFFHSPGANR EEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCCC LLDLPAFDQLDNTMKIFHLGYLLLLDSLDMPDDVYGTRSARLLAQMRDTGFETSLDLVSR EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHC KGDPRYQPLVLPALRHLDYLVINELEAGEFSGLEIRLPNGEPHITHIAAAARELLDAGVR CCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC QRVVIHYPEGAWGETPEQGGVWIPSQKLEQREIIGSVGAGDAFCAGFLYGCHERWTLTES CCEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH IKLAHACARASLLCANAIDGAKTLEELQTEMSD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA