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The map label for this gene is yadK [H]

Identifier: 209396190

GI number: 209396190

Start: 155429

End: 156019

Strand: Reverse

Name: yadK [H]

Synonym: ECH74115_0145

Alternate gene names: 209396190

Gene position: 156019-155429 (Counterclockwise)

Preceding gene: 209395811

Following gene: 209396930

Centisome position: 2.8

GC content: 47.21

Gene sequence:

>591_bases
ATGCTATGCAGGCATCATAAAATCGTACACTTTTTAGGGCTGGCAACAGCCCTTATCACGCCTTTTGCCTATTCCGGCCA
GGATGTGGATCTCACCGCAAAGATCGTGCCCAGCACCTGTCAGGTTGAAGTCAGTAATAATGGCGTTGTCGATCTCGGCA
CAGTGACGCTGGACTATTTTGCCGACAATGTAACCCCGACAACGGATTATGCGGGTGGCAAAACGTTTAATGTGAATGTG
GTCTCTTGCGATAACATTCAAACGACACAGTCGCAAATGAAATTAGATTTTCAGCCGCAGGCGGGATCGCTTGCACAGGC
GAATAATCAAATTTTTAGTAATGAATATGAACAGCAGGCTACCGGGGCGAAAAACGTCGGCATTGTGATTTTTTCGGCCC
AACCGAATCAGCAGACATTTAACGTGCGAGGAACGGATGGTTCCTCAACAGCAATTTATTCGGTAGCACCTGGCAATGCT
GTTCCCTCAACCTGGACCTTTTATTCCCGTATGCAGCGGGTGAATAATGCCCTTCCTCCTGAATCGGGAATGGTGAGAAG
CCAGGTTATTGTTAACGTATCTTACGAATAA

Upstream 100 bases:

>100_bases
TTGCGGAAGGTAGATTGGTAACCGATGTAAGACCGGGTAATTTCCGCTCTCCCACGACTTTCACGATCACTTATCAGTAA
TAGCGGATAAGGATATTAGA

Downstream 100 bases:

>100_bases
TAAGGATAATTATGCAAAGGAAAGGCAATAAACTGTTGATTCAGTTATGCAGTGTGATACTGCTATTTTTTACCACATCC
TGGTATGCATTGGCGAATGA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLCRHHKIVHFLGLATALITPFAYSGQDVDLTAKIVPSTCQVEVSNNGVVDLGTVTLDYFADNVTPTTDYAGGKTFNVNV
VSCDNIQTTQSQMKLDFQPQAGSLAQANNQIFSNEYEQQATGAKNVGIVIFSAQPNQQTFNVRGTDGSSTAIYSVAPGNA
VPSTWTFYSRMQRVNNALPPESGMVRSQVIVNVSYE

Sequences:

>Translated_196_residues
MLCRHHKIVHFLGLATALITPFAYSGQDVDLTAKIVPSTCQVEVSNNGVVDLGTVTLDYFADNVTPTTDYAGGKTFNVNV
VSCDNIQTTQSQMKLDFQPQAGSLAQANNQIFSNEYEQQATGAKNVGIVIFSAQPNQQTFNVRGTDGSSTAIYSVAPGNA
VPSTWTFYSRMQRVNNALPPESGMVRSQVIVNVSYE
>Mature_196_residues
MLCRHHKIVHFLGLATALITPFAYSGQDVDLTAKIVPSTCQVEVSNNGVVDLGTVTLDYFADNVTPTTDYAGGKTFNVNV
VSCDNIQTTQSQMKLDFQPQAGSLAQANNQIFSNEYEQQATGAKNVGIVIFSAQPNQQTFNVRGTDGSSTAIYSVAPGNA
VPSTWTFYSRMQRVNNALPPESGMVRSQVIVNVSYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786329, Length=193, Percent_Identity=40.9326424870466, Blast_Score=143, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21193; Mature: 21193

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCRHHKIVHFLGLATALITPFAYSGQDVDLTAKIVPSTCQVEVSNNGVVDLGTVTLDYF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEEEE
ADNVTPTTDYAGGKTFNVNVVSCDNIQTTQSQMKLDFQPQAGSLAQANNQIFSNEYEQQA
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHEEEEECCCCCCHHHCCCCHHCCHHHHHH
TGAKNVGIVIFSAQPNQQTFNVRGTDGSSTAIYSVAPGNAVPSTWTFYSRMQRVNNALPP
CCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
ESGMVRSQVIVNVSYE
CCCCEEEEEEEEEECC
>Mature Secondary Structure
MLCRHHKIVHFLGLATALITPFAYSGQDVDLTAKIVPSTCQVEVSNNGVVDLGTVTLDYF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEEEE
ADNVTPTTDYAGGKTFNVNVVSCDNIQTTQSQMKLDFQPQAGSLAQANNQIFSNEYEQQA
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHEEEEECCCCCCHHHCCCCHHCCHHHHHH
TGAKNVGIVIFSAQPNQQTFNVRGTDGSSTAIYSVAPGNAVPSTWTFYSRMQRVNNALPP
CCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
ESGMVRSQVIVNVSYE
CCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]