Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209396930
Identifier: 209396930
GI number: 209396930
Start: 154308
End: 155417
Strand: Reverse
Name: 209396930
Synonym: ECH74115_0144
Alternate gene names: NA
Gene position: 155417-154308 (Counterclockwise)
Preceding gene: 209396190
Following gene: 209399403
Centisome position: 2.79
GC content: 43.6
Gene sequence:
>1110_bases ATGCAAAGGAAAGGCAATAAACTGTTGATTCAGTTATGCAGTGTGATACTGCTATTTTTTACCACATCCTGGTATGCATT GGCGAATGAATGTTATATAGAGAGAAATGCTGAAGGGGATTATCACATGAAGATAAGCTCTACTCAGCTTAGTCTGGCGT CACAAATGGTCGAGGTTCCGACAGAAATAGCCGAAGCTACATGGGATGTAAATATTCAACTAAGAGGCGATGCCATAGGG TGTAAATCTCTTGGGGATAGTAAGGCAGTTCACTTTCTTAATACAGCTGACCCAAGTTTAATATCCACGTACACCACAAC GAATGGCGCAGCGTTATTAAAAACAACTGTTCCAGGCATTGTGTATTCTGTCGAGTTATTATGCCTTAGTTGTGGTGCCG CAGATGAACTTGATTTATGGCTACCTGCACAAAGTGGCGCAGATAACTTCATACCAAGCACCCAGACGAAATGGGCCTAT GAGTACAGTGATCAAAGTTGGTATTTACGTTTTCGCTTATTCATAACTCCTGAATTTAAACCCAAGAATGGTGTTTCCAG CGGAACAACGATAGCAGGAAAGATTGCGTCATGGTATATAGGTACCAATGACCAGCCGTGGATCAACTTTTACATTGACA ATGACTCTTTAAAGTTTTTCGTCGATGAACCGACCTGTGCAACAGTTGCCCTGGCACAAGATCAGGGCAACGTCAGTGGC AATCAGGTAACGCTTGGGAACAGCTATGTTTCGGAAGTGAAAAATGGGCTTACGCGGGAAATCCCTTTTTCTATCCGTGC TGAATACTGTTATGCCAGTAAAATTACGGTTAAGTTGAAAGCGGCAAATAAACCCAGCGATGCCACACTGGTGGGTAAAA CGACTGGCTCGGCTTCAGGCGTGGCTGTAAAAGTAAATTCAACTTATGACAATAGCAAAGTATTGTTAAAAGCAGATGGT AGCAACACGGTTGACTACAACTTCGCCGCCTGGTCAAACAACCTGCTGTTTTTACCTTTTACGGCGCAGCTGGTACCGGA TGGTAGCGGTAATGCTGTCGGTGTTGGAACATTTTCAGGTAACGCGACCTTCTCCTTTACCTACGAATAA
Upstream 100 bases:
>100_bases ATTCCCGTATGCAGCGGGTGAATAATGCCCTTCCTCCTGAATCGGGAATGGTGAGAAGCCAGGTTATTGTTAACGTATCT TACGAATAATAAGGATAATT
Downstream 100 bases:
>100_bases GTAAAACGTCATTCCCTCCTCATCGCACCAGAGTTCTGCTCTGGTGCGAACATTTCCCCACACTAATAACCATTGCCTCC CTGTTTTCGGCTGTTAGAAT
Product: fimbrial protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MQRKGNKLLIQLCSVILLFFTTSWYALANECYIERNAEGDYHMKISSTQLSLASQMVEVPTEIAEATWDVNIQLRGDAIG CKSLGDSKAVHFLNTADPSLISTYTTTNGAALLKTTVPGIVYSVELLCLSCGAADELDLWLPAQSGADNFIPSTQTKWAY EYSDQSWYLRFRLFITPEFKPKNGVSSGTTIAGKIASWYIGTNDQPWINFYIDNDSLKFFVDEPTCATVALAQDQGNVSG NQVTLGNSYVSEVKNGLTREIPFSIRAEYCYASKITVKLKAANKPSDATLVGKTTGSASGVAVKVNSTYDNSKVLLKADG SNTVDYNFAAWSNNLLFLPFTAQLVPDGSGNAVGVGTFSGNATFSFTYE
Sequences:
>Translated_369_residues MQRKGNKLLIQLCSVILLFFTTSWYALANECYIERNAEGDYHMKISSTQLSLASQMVEVPTEIAEATWDVNIQLRGDAIG CKSLGDSKAVHFLNTADPSLISTYTTTNGAALLKTTVPGIVYSVELLCLSCGAADELDLWLPAQSGADNFIPSTQTKWAY EYSDQSWYLRFRLFITPEFKPKNGVSSGTTIAGKIASWYIGTNDQPWINFYIDNDSLKFFVDEPTCATVALAQDQGNVSG NQVTLGNSYVSEVKNGLTREIPFSIRAEYCYASKITVKLKAANKPSDATLVGKTTGSASGVAVKVNSTYDNSKVLLKADG SNTVDYNFAAWSNNLLFLPFTAQLVPDGSGNAVGVGTFSGNATFSFTYE >Mature_369_residues MQRKGNKLLIQLCSVILLFFTTSWYALANECYIERNAEGDYHMKISSTQLSLASQMVEVPTEIAEATWDVNIQLRGDAIG CKSLGDSKAVHFLNTADPSLISTYTTTNGAALLKTTVPGIVYSVELLCLSCGAADELDLWLPAQSGADNFIPSTQTKWAY EYSDQSWYLRFRLFITPEFKPKNGVSSGTTIAGKIASWYIGTNDQPWINFYIDNDSLKFFVDEPTCATVALAQDQGNVSG NQVTLGNSYVSEVKNGLTREIPFSIRAEYCYASKITVKLKAANKPSDATLVGKTTGSASGVAVKVNSTYDNSKVLLKADG SNTVDYNFAAWSNNLLFLPFTAQLVPDGSGNAVGVGTFSGNATFSFTYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40116; Mature: 40116
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRKGNKLLIQLCSVILLFFTTSWYALANECYIERNAEGDYHMKISSTQLSLASQMVEVP CCCCCHHHHHHHHHHHHHHHHCCHHEEECEEEEEECCCCCEEEEEECHHHHHHHHHHHCC TEIAEATWDVNIQLRGDAIGCKSLGDSKAVHFLNTADPSLISTYTTTNGAALLKTTVPGI HHHHHCEEEEEEEEECCEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCH VYSVELLCLSCGAADELDLWLPAQSGADNFIPSTQTKWAYEYSDQSWYLRFRLFITPEFK HHEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCC PKNGVSSGTTIAGKIASWYIGTNDQPWINFYIDNDSLKFFVDEPTCATVALAQDQGNVSG CCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCEEEEECCCCEEEEEEECCCCCCCC NQVTLGNSYVSEVKNGLTREIPFSIRAEYCYASKITVKLKAANKPSDATLVGKTTGSASG CEEEECCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEEECCCCCCC VAVKVNSTYDNSKVLLKADGSNTVDYNFAAWSNNLLFLPFTAQLVPDGSGNAVGVGTFSG EEEEEECCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEEEEEEEECCCCCEEEEEEECC NATFSFTYE CEEEEEEEC >Mature Secondary Structure MQRKGNKLLIQLCSVILLFFTTSWYALANECYIERNAEGDYHMKISSTQLSLASQMVEVP CCCCCHHHHHHHHHHHHHHHHCCHHEEECEEEEEECCCCCEEEEEECHHHHHHHHHHHCC TEIAEATWDVNIQLRGDAIGCKSLGDSKAVHFLNTADPSLISTYTTTNGAALLKTTVPGI HHHHHCEEEEEEEEECCEECCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCH VYSVELLCLSCGAADELDLWLPAQSGADNFIPSTQTKWAYEYSDQSWYLRFRLFITPEFK HHEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCC PKNGVSSGTTIAGKIASWYIGTNDQPWINFYIDNDSLKFFVDEPTCATVALAQDQGNVSG CCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCEEEEECCCCEEEEEEECCCCCCCC NQVTLGNSYVSEVKNGLTREIPFSIRAEYCYASKITVKLKAANKPSDATLVGKTTGSASG CEEEECCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEEECCCCCCC VAVKVNSTYDNSKVLLKADGSNTVDYNFAAWSNNLLFLPFTAQLVPDGSGNAVGVGTFSG EEEEEECCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEEEEEEEECCCCCEEEEEEECC NATFSFTYE CEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA