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The map label for this gene is ssaV [H]

Identifier: 209395993

GI number: 209395993

Start: 4710122

End: 4712149

Strand: Reverse

Name: ssaV [H]

Synonym: ECH74115_5063

Alternate gene names: 209395993

Gene position: 4712149-4710122 (Counterclockwise)

Preceding gene: 209397924

Following gene: 209396453

Centisome position: 84.57

GC content: 40.53

Gene sequence:

>2028_bases
ATGAATAAACTCTTAAATATATTTAAAAAAGCAGAGTCATATCACGATCTTATTCTGGCTCTCTTCTTCTTTATGGCTGT
AATGATGATGATTATTCCACTACCAACAGTTGTGGTGGATATCATTATCGCGATTAATATTTCGACAGCTTTACTTTTAT
TAATGCTCTCAATCTATATAAAAAATCCTCTTGAACTAACTTCTTTCCCCACAATCCTGTTGATTACGACGTTGATGCGC
CTGTCGCTCAGTGTTAGTACAACCAGACTTATTCTGCTGCATCACGATGCGGGTGACATTATTTACTCCTTCGGTAACTT
TGTTGTTGGCGGTAATATTGTTGTTGGCCTGGTTATTTTTACTATTATCACCATTGTTCAATTTATGGTTATTACAAAAG
GGGCCGAGCGTGTTGCTGAAGTGAGTGCTCGTTTTTCCCTTGATGGTATGCCAGGAAAGCAAATGAGTATTGATGGTGAT
ATGCGCGCAGGCGTTATTGACCCGCTTGAGGCAAAAGTTCTTCGCTCCCGAGTGCAAAAGGAAAGCCAGTTTTATGGTTC
AATGGACGGGGCGATGAAGTTTGTAAAAGGGGACGCTATTGCTGGTATCATTATTGTTTTAGTTAACCTTTTTGGTGGCG
TGCTCATTGGTATGTGGCAATTTGACATGCCATTTAGTGCGGCACTTAGCCTGTTTTCTGTATTGTCTGTCGGTGATGCT
TTGGTTGCCCAGATCCCTGCGCTTATTATTTCTGTCACCGCAGGCGTGGTTGTTACTCGTGTGCCCGGTGAAAGCGAAAA
AGAAGAAAACCTTGCAGGTGATATTGTTCAACAGGTTTCTGTTAATAGTCGCCCTTTTTTAATCAGTGCCGCACTAATGC
TCGTAATGGCGATTATTCCGGGCTTTCCTGCATTGGTCTTCTTATTTCTGGCGGTTTGCCTGTTGGGGATAGCCTGGAAA
TTACAGAAGAAAAGAACATTTGGAACTGGCAATAATAAGGATGCTATGGGAGCTGATTTGTCTAATAGCCAAAACATCTC
ACCGGGCGCTGAGCCATTGATTTTAAACTTAAGTAGTAATATTTATAGTTCAGACATTACACAGCAAATTGAGGTCATGC
GTTGGAATTTCTTTGAGGAAAGTGGAATTCCATTGCCTAAGATTATTGTTAATCCGGTTAAAAATAATGATAGCGCAATA
GAATTTTTGCTCTATCAAGAGTCAATATACAAAGATACTCTTATAGATGATACTGTCTATTTTGAGGCTGGGCATGCAGA
GATATCATTCGAATTTGTCCAGGAAAAGCTTTCGACTAACTCTATCGTATATAAGACGAATAAGACTAATCAACAGCTCG
CTCACCTTACAGGTATGGATGTTTATGCAACAACAAATGATAAGATAACGTTTTTGCTAAAGAAACTTGTATTGTCTAAT
GCCAAAGAGTTCATCGGCGTACAAGAAACGCGTTATTTGATGGACATCATGGAGAGAAAATATAACGAGCTTGTGAAAGA
GCTGCAGCGCCAGCTTGGTTTGAGCAAAATTGTTGACATCCTACAACGTCTCGTAGAGGAAAATGTCTCAATTAGAGACC
TGAGAACTATCTTTGAGACGCTTATTTTTTGGTCAACAAAAGAAAAGGATGTGGTTATCTTGTGCGAATACGTTCGTATT
GCCCTGCGTCGGCATATTTTAGGTCGCTATAGCGTTAGCGGTACACTTCTGAACGTTTGGCTTATTGGCTCTGATATTGA
AAATGAGCTACGAGAGTCGATCAGACAAACGTCATCAGGTTCGTATCTGAATATCTCACCGGAGCGAACTGAGCAGATAA
TTGGCTTCTTAAAAAATATCATGAATCCAACGGGGAACGGCGTCATTCTGACCGCTTTAGATATCAGGCGCTATGTGAAG
AAAATGATTGAAGGTTCGTTCCCGTCAGTCCCCGTGCTCTCTTTTCAGGAGGTTGGGAATAATATCGAACTTAAAGTATT
AGGAACGGTAAATGATTTCAGAGCATGA

Upstream 100 bases:

>100_bases
TGTGCTTAAGTTGTTTGTTAACCAATATCGATGTTTTTTTTCTAATGAATACTTTTCAACAGCATGTGCAGATTATTGAG
CGCGTTCGCAGGATGACATC

Downstream 100 bases:

>100_bases
TTCTGTATTGGAAAAATACCCACGTATTCAGAAAGTGCTCAATAGCACTGTGCCGGCATTATCATTAAATTCGTCTACCA
GATATGAAGGCAAGATTATC

Product: type III secretion protein, HrcV family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MNKLLNIFKKAESYHDLILALFFFMAVMMMIIPLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMR
LSLSVSTTRLILLHHDAGDIIYSFGNFVVGGNIVVGLVIFTIITIVQFMVITKGAERVAEVSARFSLDGMPGKQMSIDGD
MRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFGGVLIGMWQFDMPFSAALSLFSVLSVGDA
LVAQIPALIISVTAGVVVTRVPGESEKEENLAGDIVQQVSVNSRPFLISAALMLVMAIIPGFPALVFLFLAVCLLGIAWK
LQKKRTFGTGNNKDAMGADLSNSQNISPGAEPLILNLSSNIYSSDITQQIEVMRWNFFEESGIPLPKIIVNPVKNNDSAI
EFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKTNQQLAHLTGMDVYATTNDKITFLLKKLVLSN
AKEFIGVQETRYLMDIMERKYNELVKELQRQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRI
ALRRHILGRYSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVILTALDIRRYVK
KMIEGSFPSVPVLSFQEVGNNIELKVLGTVNDFRA

Sequences:

>Translated_675_residues
MNKLLNIFKKAESYHDLILALFFFMAVMMMIIPLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMR
LSLSVSTTRLILLHHDAGDIIYSFGNFVVGGNIVVGLVIFTIITIVQFMVITKGAERVAEVSARFSLDGMPGKQMSIDGD
MRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFGGVLIGMWQFDMPFSAALSLFSVLSVGDA
LVAQIPALIISVTAGVVVTRVPGESEKEENLAGDIVQQVSVNSRPFLISAALMLVMAIIPGFPALVFLFLAVCLLGIAWK
LQKKRTFGTGNNKDAMGADLSNSQNISPGAEPLILNLSSNIYSSDITQQIEVMRWNFFEESGIPLPKIIVNPVKNNDSAI
EFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKTNQQLAHLTGMDVYATTNDKITFLLKKLVLSN
AKEFIGVQETRYLMDIMERKYNELVKELQRQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRI
ALRRHILGRYSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVILTALDIRRYVK
KMIEGSFPSVPVLSFQEVGNNIELKVLGTVNDFRA
>Mature_675_residues
MNKLLNIFKKAESYHDLILALFFFMAVMMMIIPLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMR
LSLSVSTTRLILLHHDAGDIIYSFGNFVVGGNIVVGLVIFTIITIVQFMVITKGAERVAEVSARFSLDGMPGKQMSIDGD
MRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFGGVLIGMWQFDMPFSAALSLFSVLSVGDA
LVAQIPALIISVTAGVVVTRVPGESEKEENLAGDIVQQVSVNSRPFLISAALMLVMAIIPGFPALVFLFLAVCLLGIAWK
LQKKRTFGTGNNKDAMGADLSNSQNISPGAEPLILNLSSNIYSSDITQQIEVMRWNFFEESGIPLPKIIVNPVKNNDSAI
EFLLYQESIYKDTLIDDTVYFEAGHAEISFEFVQEKLSTNSIVYKTNKTNQQLAHLTGMDVYATTNDKITFLLKKLVLSN
AKEFIGVQETRYLMDIMERKYNELVKELQRQLGLSKIVDILQRLVEENVSIRDLRTIFETLIFWSTKEKDVVILCEYVRI
ALRRHILGRYSVSGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERTEQIIGFLKNIMNPTGNGVILTALDIRRYVK
KMIEGSFPSVPVLSFQEVGNNIELKVLGTVNDFRA

Specific function: Required For Formation Of The Rod Structure Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=689, Percent_Identity=32.510885341074, Blast_Score=320, Evalue=3e-88,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 75098; Mature: 75098

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLLNIFKKAESYHDLILALFFFMAVMMMIIPLPTVVVDIIIAINISTALLLLMLSIYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNPLELTSFPTILLITTLMRLSLSVSTTRLILLHHDAGDIIYSFGNFVVGGNIVVGLVIF
CCCCCHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHCCEEECCHHHHHHHHH
TIITIVQFMVITKGAERVAEVSARFSLDGMPGKQMSIDGDMRAGVIDPLEAKVLRSRVQK
HHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH
ESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFGGVLIGMWQFDMPFSAALSLFSVLSVGDA
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LVAQIPALIISVTAGVVVTRVPGESEKEENLAGDIVQQVSVNSRPFLISAALMLVMAIIP
HHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GFPALVFLFLAVCLLGIAWKLQKKRTFGTGNNKDAMGADLSNSQNISPGAEPLILNLSSN
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
IYSSDITQQIEVMRWNFFEESGIPLPKIIVNPVKNNDSAIEFLLYQESIYKDTLIDDTVY
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
FEAGHAEISFEFVQEKLSTNSIVYKTNKTNQQLAHLTGMDVYATTNDKITFLLKKLVLSN
EECCCCEEHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHC
AKEFIGVQETRYLMDIMERKYNELVKELQRQLGLSKIVDILQRLVEENVSIRDLRTIFET
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHH
LIFWSTKEKDVVILCEYVRIALRRHILGRYSVSGTLLNVWLIGSDIENELRESIRQTSSG
HHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCC
SYLNISPERTEQIIGFLKNIMNPTGNGVILTALDIRRYVKKMIEGSFPSVPVLSFQEVGN
CEEECCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEHHHCCC
NIELKVLGTVNDFRA
CEEEEEEECCHHCCC
>Mature Secondary Structure
MNKLLNIFKKAESYHDLILALFFFMAVMMMIIPLPTVVVDIIIAINISTALLLLMLSIYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNPLELTSFPTILLITTLMRLSLSVSTTRLILLHHDAGDIIYSFGNFVVGGNIVVGLVIF
CCCCCHHCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHCCEEECCHHHHHHHHH
TIITIVQFMVITKGAERVAEVSARFSLDGMPGKQMSIDGDMRAGVIDPLEAKVLRSRVQK
HHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH
ESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFGGVLIGMWQFDMPFSAALSLFSVLSVGDA
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LVAQIPALIISVTAGVVVTRVPGESEKEENLAGDIVQQVSVNSRPFLISAALMLVMAIIP
HHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GFPALVFLFLAVCLLGIAWKLQKKRTFGTGNNKDAMGADLSNSQNISPGAEPLILNLSSN
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
IYSSDITQQIEVMRWNFFEESGIPLPKIIVNPVKNNDSAIEFLLYQESIYKDTLIDDTVY
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
FEAGHAEISFEFVQEKLSTNSIVYKTNKTNQQLAHLTGMDVYATTNDKITFLLKKLVLSN
EECCCCEEHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHC
AKEFIGVQETRYLMDIMERKYNELVKELQRQLGLSKIVDILQRLVEENVSIRDLRTIFET
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHH
LIFWSTKEKDVVILCEYVRIALRRHILGRYSVSGTLLNVWLIGSDIENELRESIRQTSSG
HHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCC
SYLNISPERTEQIIGFLKNIMNPTGNGVILTALDIRRYVKKMIEGSFPSVPVLSFQEVGN
CEEECCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEHHHCCC
NIELKVLGTVNDFRA
CEEEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]