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The map label for this gene is abrB [H]

Identifier: 209395870

GI number: 209395870

Start: 826640

End: 827686

Strand: Reverse

Name: abrB [H]

Synonym: ECH74115_0804

Alternate gene names: 209395870

Gene position: 827686-826640 (Counterclockwise)

Preceding gene: 209399368

Following gene: 209398739

Centisome position: 14.85

GC content: 56.45

Gene sequence:

>1047_bases
ATGCCAGTTTTGCAGTGGGGAATGTTATGTGTGCTATCACTTCTCCTTTCTATTGGTTTCCTCGGATTACATCTCCCGGC
GGCACTCTTACTTGGACCGATGATCGCCGGGATCATCTTCAGTATGCGCGGGGTTACCCTGCAACTCCCCCGCTCCGCTT
TTCTCGCCGCGCAGGCCATTCTTGGCTGCATGATTGCGCAAAACTTGACCGGTTCGATCCTGACCACGCTGGAGGTTAAC
TGGCCGATTGTGTTAGCTATTTTACTGGTGACGTTGCTTTCCAGCGCTATCGTGGGATGGCTACTGGTGCGCTATAGCTC
ACTGCCCGGAAATACTGGTGCCTGGGGCTCCTCGCCTGGCGGGGCGGCGGCAATGGTCGCGATGGCGCAGGATTACGGCG
CAGATATCCGCCTGGTGGCGTTTATGCAGTATCTGCGAGTGCTGTTTGTCGCGGGGGCCGCAGTTCTGGTCACGCGAATG
ATGCTGGGCGATAACGCTGAAGCGGTTAACCAGCATATCGTCTGGTTCCCGCCAGTGAGCATTAATCTCCTGCTTACTAT
TTTGCTCGCGGTCGTTGCCGGTACAGTGGGATGCCTGCTGCGTCTTCCTTCCGGCACGATGCTCATCCCGATGCTGGCGG
GCGCAGTGCTCCAGTCTGGTCAGCTCATCACCATCGAACTACCGGAATGGCTACTGGCGATGGCGTATATGGCAATTGGC
TGGCGGATTGGCCTTGGTTTCGATAAACAAATCTTACTGCGGGCACTACGCCCGCTACCACAAATCCTGCTGTCGATTTT
TGCTCTGCTGGCTATTTGTGCGGGTATGGCGTGGGGACTGACCCGGTTTATGCACATTGATTTTATGACTGCCTACCTCG
CCACCAGCCCCGGCGGGCTTGATACCGTGGCGGTCATCGCCGCAGGGAGCAATGCCGATATGGCGCTCATTATGGCGATG
CAAACCCTGCGCCTGTTCAGTATTTTGCTGACAGGGCCTGCCATTGCGCGGTTTATTTCAACCTATGCGCCGAAACGTAC
GGCCTAG

Upstream 100 bases:

>100_bases
CCAATTTTCCGGCTTTTATTGATTACCGTTATTTTTTCCATGCCCGGCATTCTTTATGCTGTATCGATACACCAAAGAGA
AAATAATGAGGGAGCAAAGG

Downstream 100 bases:

>100_bases
TGCTGGCAGCCCGGACACCAGTAAAACGGGCGAGATGACAGCGTGGTTTTCTCAATGATGCCGCCACAGCGTTCGCACAG
TTCGCCATCACGATGAAAAA

Product: protein AbrB

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MPVLQWGMLCVLSLLLSIGFLGLHLPAALLLGPMIAGIIFSMRGVTLQLPRSAFLAAQAILGCMIAQNLTGSILTTLEVN
WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM
MLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG
WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAM
QTLRLFSILLTGPAIARFISTYAPKRTA

Sequences:

>Translated_348_residues
MPVLQWGMLCVLSLLLSIGFLGLHLPAALLLGPMIAGIIFSMRGVTLQLPRSAFLAAQAILGCMIAQNLTGSILTTLEVN
WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM
MLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG
WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAM
QTLRLFSILLTGPAIARFISTYAPKRTA
>Mature_347_residues
PVLQWGMLCVLSLLLSIGFLGLHLPAALLLGPMIAGIIFSMRGVTLQLPRSAFLAAQAILGCMIAQNLTGSILTTLEVNW
PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM
LGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW
RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQ
TLRLFSILLTGPAIARFISTYAPKRTA

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=348, Percent_Identity=98.5632183908046, Blast_Score=667, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 36942; Mature: 36811

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLQWGMLCVLSLLLSIGFLGLHLPAALLLGPMIAGIIFSMRGVTLQLPRSAFLAAQAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHH
LGCMIAQNLTGSILTTLEVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCH
INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH
WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRTA
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PVLQWGMLCVLSLLLSIGFLGLHLPAALLLGPMIAGIIFSMRGVTLQLPRSAFLAAQAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHH
LGCMIAQNLTGSILTTLEVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCH
INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH
WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRTA
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]