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The map label for this gene is torT

Identifier: 209395858

GI number: 209395858

Start: 1239647

End: 1240675

Strand: Direct

Name: torT

Synonym: ECH74115_1231

Alternate gene names: 209395858

Gene position: 1239647-1240675 (Clockwise)

Preceding gene: 209396052

Following gene: 209400451

Centisome position: 22.25

GC content: 53.35

Gene sequence:

>1029_bases
ATGCGCGTGCTGCTATTTTTACTTCTTTCCCTTTTCATGTTGCCGGCATTTTCGGCTGATAACCTGTTGCGCTGGCATGA
TGCGCAGCATTTCACGGTGCAAGCCTCTATGCCGCTAAAAGCCAAACGCGTATGGAAACTGTGCGCGCTTTATCCCAGCC
TGAAAGATTCATATTGGTTATCGTTGAACTATGGTATGCAGGAGGCTGCTCGCCGCTACGGTGTGGATTTAAAAGTGCTG
GAGGCAGGCGGCTACAGCCAGTTGGCTACCCAGCAAGCACAAATCGACCAGTGTAAACAGTGGGGCGCAGAGGCCATTTT
GCTCGGTAGTAGCACGACGTCATTTCCCGATCTGCAAAAGCAAGTAGCAAATCTGCCGGTGATCGAGCTGGTAAATGCTA
TTGATGCTCCCCAGGTGAAAAGCCGCGTTGGTGTGCCCTGGTTTCAGATGGGCTATCAACCTGGGCGATATCTGGTGCAA
TGGGCGCACGGTAAACCACTGAATGTGCTGTTGATGCCCGGACCCGATAACGCCGGGGGCAGTAAGGAGATGGTCGAGGG
TTTTCGCGCAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTA
ACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATG
GGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCG
GGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAGGGGGAACTGGCAGTTGAGCAGGCCATCAGGCAATTAC
AGGGGCAATCGGTGTCTGATAATGTCAGCCCACCGATTTTAGTTCTGACGCCGAAAAATGCCGACCGCGAACATATCCGC
CGCTCGCTGTCGCCTGGGGGATTTCGTCCGGTCTATTTTTATCAGCACACATCAGCGGCTAAGAAATAA

Upstream 100 bases:

>100_bases
GGTCAGGGTTAAATTCACGGTCGGTGCACTTAAGGTGAAAAATGTTGAGTCGCAAAGCGGAATGCATCTAGCATAAAGCC
TTATTATTGATGAGGCTATC

Downstream 100 bases:

>100_bases
CCTTCGCCATGTTGCGTCACCAGTAAATCCGCGCTGAGTTTATGGCGTAAACGACGAATTAACACATCGACGGTGCGCAG
GTCAGGGTTTTCCACCCGAC

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQ
WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYFYQHTSAAKK

Sequences:

>Translated_342_residues
MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQ
WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYFYQHTSAAKK
>Mature_342_residues
MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQ
WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYFYQHTSAAKK

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family

Homologues:

Organism=Escherichia coli, GI1787228, Length=342, Percent_Identity=99.1228070175439, Blast_Score=698, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TORT_ECO57 (P58358)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   A85635
- PIR:   E90772
- RefSeq:   NP_286930.1
- RefSeq:   NP_309176.1
- ProteinModelPortal:   P58358
- EnsemblBacteria:   EBESCT00000024786
- EnsemblBacteria:   EBESCT00000058192
- GeneID:   913730
- GeneID:   959057
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1411
- KEGG:   ecs:ECs1149
- GeneTree:   EBGT00050000009722
- HOGENOM:   HBG466278
- OMA:   GVNWYQM
- ProtClustDB:   PRK10936
- BioCyc:   ECOL83334:ECS1149-MONOMER
- GO:   GO:0006810
- InterPro:   IPR001761
- InterPro:   IPR014301
- TIGRFAMs:   TIGR02955

Pfam domain/function: PF00532 Peripla_BP_1

EC number: NA

Molecular weight: Translated: 37950; Mature: 37950

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQK
EEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
QVANLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGG
HHHCCCHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCC
SKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
CHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCC
NVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK
CCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQK
EEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
QVANLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGG
HHHCCCHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCC
SKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
CHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCC
NVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK
CCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796