The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is 209695968

Identifier: 209695968

GI number: 209695968

Start: 2731097

End: 2731627

Strand: Reverse

Name: 209695968

Synonym: VSAL_I2550

Alternate gene names: NA

Gene position: 2731627-2731097 (Counterclockwise)

Preceding gene: 209695969

Following gene: 209695966

Centisome position: 82.15

GC content: 34.84

Gene sequence:

>531_bases
ATGCTTATAGATAGTATTTATAAAGATCATGGTTACATTAACCGAATTATTCAGTTGTTGGATAAAAAACTGAATCGGTT
AGAGGAAGAAAAGACAGTCAATTATAATGTAATACGTGAAAGCGTTGATTATCTATCGTCTTTTGCTGAAAAAAATCATC
ATCCAAAAGAAGATAGGATCTATCAATATTTTATTGATAAGTATGGCGAGAATAAAGCACTGACCAATTTATTGCATGAA
CACAATACGCTTTCTGCAGATACTGTTGATTTTTCAATAACACTTGAAATGATTTTACAGGATGCGATTGTCCCGAAAGA
TATTTTTAGAGAGCACTTACTTGCATTTACGAAACGCATTCGCCGACATCTTGAACTAGAAGAAAAAGAGGTATTTCCTT
TTTTAAAGGCGCAGTTAACTGAGATTGATTGGCGTAATTTAGAAAAGGGATGGGTGGAGGAAGACGATCCTGTGTTTGGT
GAAAGAGTGCATAGACGCTATGTTCAATTAGCGGAACAGGTAAGAGCTTAG

Upstream 100 bases:

>100_bases
ACATTGGACTAGTGGTTAAAAGTTGAACTGAAAAGCGGTGCTCCTTTAATAATACGTTAGACTCAAAAGGTAATCACCTG
ACAGAGTAAGGGAGGACAGG

Downstream 100 bases:

>100_bases
ATTGATAAAAAGGAGAGCGTTAGTGCTCTCCTTTTTTATTGGCTATTTTAAAATACAATCGTCAATACTGCCGCTAAAAA
AGGGATCAAGCTCTTGCAGT

Product: hemerythrin

Products: NA

Alternate protein names: Hemerythrin Family Protein

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLIDSIYKDHGYINRIIQLLDKKLNRLEEEKTVNYNVIRESVDYLSSFAEKNHHPKEDRIYQYFIDKYGENKALTNLLHE
HNTLSADTVDFSITLEMILQDAIVPKDIFREHLLAFTKRIRRHLELEEKEVFPFLKAQLTEIDWRNLEKGWVEEDDPVFG
ERVHRRYVQLAEQVRA

Sequences:

>Translated_176_residues
MLIDSIYKDHGYINRIIQLLDKKLNRLEEEKTVNYNVIRESVDYLSSFAEKNHHPKEDRIYQYFIDKYGENKALTNLLHE
HNTLSADTVDFSITLEMILQDAIVPKDIFREHLLAFTKRIRRHLELEEKEVFPFLKAQLTEIDWRNLEKGWVEEDDPVFG
ERVHRRYVQLAEQVRA
>Mature_176_residues
MLIDSIYKDHGYINRIIQLLDKKLNRLEEEKTVNYNVIRESVDYLSSFAEKNHHPKEDRIYQYFIDKYGENKALTNLLHE
HNTLSADTVDFSITLEMILQDAIVPKDIFREHLLAFTKRIRRHLELEEKEVFPFLKAQLTEIDWRNLEKGWVEEDDPVFG
ERVHRRYVQLAEQVRA

Specific function: Unknown

COG id: COG3945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21157; Mature: 21157

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDSIYKDHGYINRIIQLLDKKLNRLEEEKTVNYNVIRESVDYLSSFAEKNHHPKEDRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
YQYFIDKYGENKALTNLLHEHNTLSADTVDFSITLEMILQDAIVPKDIFREHLLAFTKRI
HHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RRHLELEEKEVFPFLKAQLTEIDWRNLEKGWVEEDDPVFGERVHRRYVQLAEQVRA
HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIDSIYKDHGYINRIIQLLDKKLNRLEEEKTVNYNVIRESVDYLSSFAEKNHHPKEDRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
YQYFIDKYGENKALTNLLHEHNTLSADTVDFSITLEMILQDAIVPKDIFREHLLAFTKRI
HHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RRHLELEEKEVFPFLKAQLTEIDWRNLEKGWVEEDDPVFGERVHRRYVQLAEQVRA
HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA