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The map label for this gene is rseA [H]

Identifier: 209695948

GI number: 209695948

Start: 2712364

End: 2712981

Strand: Reverse

Name: rseA [H]

Synonym: VSAL_I2530

Alternate gene names: 209695948

Gene position: 2712981-2712364 (Counterclockwise)

Preceding gene: 209695949

Following gene: 209695947

Centisome position: 81.59

GC content: 40.29

Gene sequence:

>618_bases
ATGACTGATAAAGCAAAAATTTCTGCTTTTATTGATAATGAAGAAATGGACAATGCGTTTATCGCTTCGTTATCAGAAAC
AAGCAATGCAGAAACATGGGCAAACTATCACTTAATTGGTGATGTAATGAGAGGGGACGCACCAAGTAGCAAAGAATGGA
ATATTGCTGCTAATGTCGCTCTTGCTCTTGAAGATGAGGCCGCTCATCAAATGAATGATAATGTGACGGCGTTTATTCCA
TCACAACCAACGCCTTCAGAGGCAAAGAAAACAATGCCAAGTTGGTTAACTCAATTTAGCCAAGTAGCAATGGCGGCGTG
TTTTTCATTAGTGGTTATTGTTGGTGTACAACAATACAACAATGACGATCCTAACGGGATCCCAACAAGCGGTGATATAC
AGGTTCTTGATACCATACCTTTTAGTGGTTCAGCTGAGCCAGTCAGTTTAACTCGAGACTCTCTGGTACCTAAATCATCG
AATGAAGCCGATGTCATGGAGCAACGCAAACGTATTAATGCAATGCTGCAAGATTATGAATTACAGCTTCGTTTAAATGC
ACATGATGGTTCTGTTGATAGAGAACTGTTAGAGCAAAATTCGACGTTGGCAGAATAA

Upstream 100 bases:

>100_bases
CGGTTCGTTCTCGTATTTTCCGAGCTCGTGAAGTCGTCGAGAAGAAAATTCAACCGCTAATGCAGCGTTAATGATTTCCA
ACGGTCAAACGGTGAAGACA

Downstream 100 bases:

>100_bases
ATGAAAAGAATCCTGATCAGCCTAATTGCCTTGGTCAGCATCTTTCCAATAATGGCCTCGGCAGAAGATAAACCTTCTGC
GGAGGCCTTGTTGCATCAGA

Product: sigma-E factor negative regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTDKAKISAFIDNEEMDNAFIASLSETSNAETWANYHLIGDVMRGDAPSSKEWNIAANVALALEDEAAHQMNDNVTAFIP
SQPTPSEAKKTMPSWLTQFSQVAMAACFSLVVIVGVQQYNNDDPNGIPTSGDIQVLDTIPFSGSAEPVSLTRDSLVPKSS
NEADVMEQRKRINAMLQDYELQLRLNAHDGSVDRELLEQNSTLAE

Sequences:

>Translated_205_residues
MTDKAKISAFIDNEEMDNAFIASLSETSNAETWANYHLIGDVMRGDAPSSKEWNIAANVALALEDEAAHQMNDNVTAFIP
SQPTPSEAKKTMPSWLTQFSQVAMAACFSLVVIVGVQQYNNDDPNGIPTSGDIQVLDTIPFSGSAEPVSLTRDSLVPKSS
NEADVMEQRKRINAMLQDYELQLRLNAHDGSVDRELLEQNSTLAE
>Mature_204_residues
TDKAKISAFIDNEEMDNAFIASLSETSNAETWANYHLIGDVMRGDAPSSKEWNIAANVALALEDEAAHQMNDNVTAFIPS
QPTPSEAKKTMPSWLTQFSQVAMAACFSLVVIVGVQQYNNDDPNGIPTSGDIQVLDTIPFSGSAEPVSLTRDSLVPKSSN
EADVMEQRKRINAMLQDYELQLRLNAHDGSVDRELLEQNSTLAE

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=194, Percent_Identity=39.6907216494845, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 22450; Mature: 22319

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKAKISAFIDNEEMDNAFIASLSETSNAETWANYHLIGDVMRGDAPSSKEWNIAANVA
CCCCCEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHEEHHHHCCCCCCCCCCEEEEEEE
LALEDEAAHQMNDNVTAFIPSQPTPSEAKKTMPSWLTQFSQVAMAACFSLVVIVGVQQYN
EEECCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NDDPNGIPTSGDIQVLDTIPFSGSAEPVSLTRDSLVPKSSNEADVMEQRKRINAMLQDYE
CCCCCCCCCCCCEEEEEECCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCEE
LQLRLNAHDGSVDRELLEQNSTLAE
EEEEEECCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDKAKISAFIDNEEMDNAFIASLSETSNAETWANYHLIGDVMRGDAPSSKEWNIAANVA
CCCCEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHEEHHHHCCCCCCCCCCEEEEEEE
LALEDEAAHQMNDNVTAFIPSQPTPSEAKKTMPSWLTQFSQVAMAACFSLVVIVGVQQYN
EEECCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NDDPNGIPTSGDIQVLDTIPFSGSAEPVSLTRDSLVPKSSNEADVMEQRKRINAMLQDYE
CCCCCCCCCCCCEEEEEECCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCEE
LQLRLNAHDGSVDRELLEQNSTLAE
EEEEEECCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]