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The map label for this gene is rseB [H]

Identifier: 209695947

GI number: 209695947

Start: 2711386

End: 2712363

Strand: Reverse

Name: rseB [H]

Synonym: VSAL_I2529

Alternate gene names: 209695947

Gene position: 2712363-2711386 (Counterclockwise)

Preceding gene: 209695948

Following gene: 209695946

Centisome position: 81.57

GC content: 39.88

Gene sequence:

>978_bases
ATGAAAAGAATCCTGATCAGCCTAATTGCCTTGGTCAGCATCTTTCCAATAATGGCCTCGGCAGAAGATAAACCTTCTGC
GGAGGCCTTGTTGCATCAGATGGATGAGGCTAGCCATAGTTTAAATTACGAACTTTCTTACATTTTAGTGAAGAAAAACA
GTATTGAACCTTTCATGTACCGCCATTCTCATACTAAAGATATGACGTTATCTCACCTCGTCTATTTAAGTGGTTCAATG
CGAGAGGTGATCCGCCGTAATGATGAAATCAGTTATTTGGAACAAGGAAGTAAACCTTTCTCAATTCAATCTGAAGCCAT
TGTTGCGCCTATTATTCCGCTATTACATAAAAATGTGGCTGAGCTTAATCAGTATTACGATTTTATTTCTATGGGCAGAG
CGAGAGAAGCTGGGTCTCCAACGCAAGTGATTAGAATCGTTTCAAAAGATGGCGCTCGTTATTCCTACGTAGTTTGGATC
GATGAAAGAAGTAAGTTGCCTTTAAGAACCGATCTTGTTAGCCGAGACGGTGATATTATTGAGCAGTATCGAGTTGTTTC
GTACACCGTCAACGATCAAATTACTGAATTTATGAAAAAACGCCTAGGGACTGTTGAGCTTCCTAAGGTGCTAAAAATAC
CAGCGGCAACGAATGAAGCGGCAATGTGGTCGGTTAATTGGATACCGCAAGGGTTTAAAAAGATTAATTTTAATCGCTAT
CGTTTATCTATGAATCAACGTTCAGTAGAAAGTAAAATGTTTTCTGATGGCTTGTTTAATTTTTCGGTCTATATTTCTGA
AGCGGATAAGCTAAGTCACAAAGAGCAACTGGTGACACAAGGCCGTCGTTCGCTGCACAGTTATATCAAAGGTGAATATG
AAATTAGTGTTGTTGGGGATATCCCTACCGTAACAGCAAAGCGTATTGCCAACTCTGTCGTATTTGATTCTTCAGACGTC
AACGTTAAGGAGAAGTAA

Upstream 100 bases:

>100_bases
TGCAATGCTGCAAGATTATGAATTACAGCTTCGTTTAAATGCACATGATGGTTCTGTTGATAGAGAACTGTTAGAGCAAA
ATTCGACGTTGGCAGAATAA

Downstream 100 bases:

>100_bases
GAATATGATGACTGCATTAGCAACGGTTCTTGATGTTCAAGATGATATTGTTGTTGTTGGTTGCCAACAAAAAACAAGTT
GTAATCATTGTGCGTCACAA

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKRILISLIALVSIFPIMASAEDKPSAEALLHQMDEASHSLNYELSYILVKKNSIEPFMYRHSHTKDMTLSHLVYLSGSM
REVIRRNDEISYLEQGSKPFSIQSEAIVAPIIPLLHKNVAELNQYYDFISMGRAREAGSPTQVIRIVSKDGARYSYVVWI
DERSKLPLRTDLVSRDGDIIEQYRVVSYTVNDQITEFMKKRLGTVELPKVLKIPAATNEAAMWSVNWIPQGFKKINFNRY
RLSMNQRSVESKMFSDGLFNFSVYISEADKLSHKEQLVTQGRRSLHSYIKGEYEISVVGDIPTVTAKRIANSVVFDSSDV
NVKEK

Sequences:

>Translated_325_residues
MKRILISLIALVSIFPIMASAEDKPSAEALLHQMDEASHSLNYELSYILVKKNSIEPFMYRHSHTKDMTLSHLVYLSGSM
REVIRRNDEISYLEQGSKPFSIQSEAIVAPIIPLLHKNVAELNQYYDFISMGRAREAGSPTQVIRIVSKDGARYSYVVWI
DERSKLPLRTDLVSRDGDIIEQYRVVSYTVNDQITEFMKKRLGTVELPKVLKIPAATNEAAMWSVNWIPQGFKKINFNRY
RLSMNQRSVESKMFSDGLFNFSVYISEADKLSHKEQLVTQGRRSLHSYIKGEYEISVVGDIPTVTAKRIANSVVFDSSDV
NVKEK
>Mature_325_residues
MKRILISLIALVSIFPIMASAEDKPSAEALLHQMDEASHSLNYELSYILVKKNSIEPFMYRHSHTKDMTLSHLVYLSGSM
REVIRRNDEISYLEQGSKPFSIQSEAIVAPIIPLLHKNVAELNQYYDFISMGRAREAGSPTQVIRIVSKDGARYSYVVWI
DERSKLPLRTDLVSRDGDIIEQYRVVSYTVNDQITEFMKKRLGTVELPKVLKIPAATNEAAMWSVNWIPQGFKKINFNRY
RLSMNQRSVESKMFSDGLFNFSVYISEADKLSHKEQLVTQGRRSLHSYIKGEYEISVVGDIPTVTAKRIANSVVFDSSDV
NVKEK

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=319, Percent_Identity=39.8119122257053, Blast_Score=268, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 37138; Mature: 37138

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILISLIALVSIFPIMASAEDKPSAEALLHQMDEASHSLNYELSYILVKKNSIEPFMY
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHE
RHSHTKDMTLSHLVYLSGSMREVIRRNDEISYLEQGSKPFSIQSEAIVAPIIPLLHKNVA
ECCCCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ELNQYYDFISMGRAREAGSPTQVIRIVSKDGARYSYVVWIDERSKLPLRTDLVSRDGDII
HHHHHHHHHHCCCCCCCCCHHHEEEEEECCCCEEEEEEEEECCCCCCHHHHHHCCCCHHH
EQYRVVSYTVNDQITEFMKKRLGTVELPKVLKIPAATNEAAMWSVNWIPQGFKKINFNRY
HHEEEEEEEHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCEEEEEECCCCCHHHCCCEEE
RLSMNQRSVESKMFSDGLFNFSVYISEADKLSHKEQLVTQGRRSLHSYIKGEYEISVVGD
EEECCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
IPTVTAKRIANSVVFDSSDVNVKEK
CCCHHHHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure
MKRILISLIALVSIFPIMASAEDKPSAEALLHQMDEASHSLNYELSYILVKKNSIEPFMY
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHE
RHSHTKDMTLSHLVYLSGSMREVIRRNDEISYLEQGSKPFSIQSEAIVAPIIPLLHKNVA
ECCCCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ELNQYYDFISMGRAREAGSPTQVIRIVSKDGARYSYVVWIDERSKLPLRTDLVSRDGDII
HHHHHHHHHHCCCCCCCCCHHHEEEEEECCCCEEEEEEEEECCCCCCHHHHHHCCCCHHH
EQYRVVSYTVNDQITEFMKKRLGTVELPKVLKIPAATNEAAMWSVNWIPQGFKKINFNRY
HHEEEEEEEHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCEEEEEECCCCCHHHCCCEEE
RLSMNQRSVESKMFSDGLFNFSVYISEADKLSHKEQLVTQGRRSLHSYIKGEYEISVVGD
EEECCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
IPTVTAKRIANSVVFDSSDVNVKEK
CCCHHHHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]