Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is acpS
Identifier: 209695939
GI number: 209695939
Start: 2704391
End: 2704771
Strand: Reverse
Name: acpS
Synonym: VSAL_I2521
Alternate gene names: 209695939
Gene position: 2704771-2704391 (Counterclockwise)
Preceding gene: 209695940
Following gene: 209695937
Centisome position: 81.34
GC content: 43.57
Gene sequence:
>381_bases ATGGCAATTGTTGGCCTTGGGACTGATATCGCTGAAATAGAAAGGGTAGAGAAAGCCCTTTCTCGCTCAGGAGATGCGTT CGCTGAACGCATCTTAAGTCAGTCTGAGTTTGAGCGTTATCAAGGATTAAAGCAAAAAGGGCGTTTTCTCGCAAAACGTT TTGCCGCAAAAGAAGCCGCGTCAAAAGCCTTAGGGACTGGAATTTCTCATGGAGTGACTTTTCATGATTTTACGATTTCA AATGATGATAATGGAAAACCGATCTTAACGCTTTCGGGTAAAGCACTTGTGTTGTCTCAGCAGTCCTCAGTGTCACACAT TCACCTCACCATTTCTGATGAGCGTCATTATGCGGTAGCGACGGTTATTTTTGAGTCTTAA
Upstream 100 bases:
>100_bases AGTTAAATATTGGTCACTCGATTATGGGAAGAGCGGTGTTTGATGGATTAGAGAAAGCGGTCGCTGATATGCATAGAATT ATGCTAGGTGCTCGTAAGTA
Downstream 100 bases:
>100_bases TACTACGCCACTAATTACTTGATTAATGGCGTATCACTAAGATAGGAAGTCTTAGTTAAGTAAGATTTGAGCGTCAGAGG TTACTTTTTCCATTTCGTCT
Product: 4'-phosphopantetheinyl transferase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MAIVGLGTDIAEIERVEKALSRSGDAFAERILSQSEFERYQGLKQKGRFLAKRFAAKEAASKALGTGISHGVTFHDFTIS NDDNGKPILTLSGKALVLSQQSSVSHIHLTISDERHYAVATVIFES
Sequences:
>Translated_126_residues MAIVGLGTDIAEIERVEKALSRSGDAFAERILSQSEFERYQGLKQKGRFLAKRFAAKEAASKALGTGISHGVTFHDFTIS NDDNGKPILTLSGKALVLSQQSSVSHIHLTISDERHYAVATVIFES >Mature_125_residues AIVGLGTDIAEIERVEKALSRSGDAFAERILSQSEFERYQGLKQKGRFLAKRFAAKEAASKALGTGISHGVTFHDFTISN DDNGKPILTLSGKALVLSQQSSVSHIHLTISDERHYAVATVIFES
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family
Homologues:
Organism=Escherichia coli, GI1788916, Length=126, Percent_Identity=55.5555555555556, Blast_Score=146, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACPS_ALISL (B6EKM5)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002263869.1 - GeneID: 6988202 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I2521 - HOGENOM: HBG734479 - OMA: VHVSITH - ProtClustDB: PRK00070 - GO: GO:0005737 - HAMAP: MF_00101 - InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 - TIGRFAMs: TIGR00516 - TIGRFAMs: TIGR00556
Pfam domain/function: PF01648 ACPS; SSF56214 4-PPT_transf
EC number: =2.7.8.7
Molecular weight: Translated: 13692; Mature: 13560
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVGLGTDIAEIERVEKALSRSGDAFAERILSQSEFERYQGLKQKGRFLAKRFAAKEAA CEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKALGTGISHGVTFHDFTISNDDNGKPILTLSGKALVLSQQSSVSHIHLTISDERHYAVA HHHHCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEECCCCCEEEEEEEECCCCEEEE TVIFES EEEECC >Mature Secondary Structure AIVGLGTDIAEIERVEKALSRSGDAFAERILSQSEFERYQGLKQKGRFLAKRFAAKEAA EEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKALGTGISHGVTFHDFTISNDDNGKPILTLSGKALVLSQQSSVSHIHLTISDERHYAVA HHHHCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEECCCCCEEEEEEEECCCCEEEE TVIFES EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA