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The map label for this gene is 209695833

Identifier: 209695833

GI number: 209695833

Start: 2576855

End: 2577166

Strand: Reverse

Name: 209695833

Synonym: VSAL_I2409

Alternate gene names: NA

Gene position: 2577166-2576855 (Counterclockwise)

Preceding gene: 209695834

Following gene: 209695832

Centisome position: 77.5

GC content: 42.63

Gene sequence:

>312_bases
ATGAAAAAAGTAATTGGACTGGCAGTTATCGGCTTATTGGTATCAACGTCTACATTTGCAGCGGGTGATGCCGCAGCAGG
GAAAGCAAAATCTGCAATTTGTGCTTCATGTCATGGGGCGAATGGTATTGCGGTGATTCCGGGTTACCCGAACTTGAAAG
GGCAGAATGCACAATATATCGAATCTTCATTAAAAGCTTATAAGAGTAAGCAGCGTAATGGCGGTAATGCGGCAATTATG
CAACCAATGGCGGCAATGCTGAATGATACTGATATCTCAAATTTAGCGGCTTACTATTCTACGATGAAATAG

Upstream 100 bases:

>100_bases
TCAGGAAAAGAGTGTGAGCTGATCTGGCATAAATCAGGCTCAATATAGACATTCGGAATTTACTTGGCAAAATGACTAAA
AAAATAAAGGAGCAGTGTAA

Downstream 100 bases:

>100_bases
AGCGGAAGTAAGTAATGCGATTCCTTGGTTGAATGTTGATGGCCCCTCGACGATAATGGTCTGATATTTACTATTGATGT
TAAGGGATTAATATGAAGAA

Product: cytochrome c-552

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKKVIGLAVIGLLVSTSTFAAGDAAAGKAKSAICASCHGANGIAVIPGYPNLKGQNAQYIESSLKAYKSKQRNGGNAAIM
QPMAAMLNDTDISNLAAYYSTMK

Sequences:

>Translated_103_residues
MKKVIGLAVIGLLVSTSTFAAGDAAAGKAKSAICASCHGANGIAVIPGYPNLKGQNAQYIESSLKAYKSKQRNGGNAAIM
QPMAAMLNDTDISNLAAYYSTMK
>Mature_103_residues
MKKVIGLAVIGLLVSTSTFAAGDAAAGKAKSAICASCHGANGIAVIPGYPNLKGQNAQYIESSLKAYKSKQRNGGNAAIM
QPMAAMLNDTDISNLAAYYSTMK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10570; Mature: 10570

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIGLAVIGLLVSTSTFAAGDAAAGKAKSAICASCHGANGIAVIPGYPNLKGQNAQYI
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHH
ESSLKAYKSKQRNGGNAAIMQPMAAMLNDTDISNLAAYYSTMK
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKVIGLAVIGLLVSTSTFAAGDAAAGKAKSAICASCHGANGIAVIPGYPNLKGQNAQYI
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHH
ESSLKAYKSKQRNGGNAAIMQPMAAMLNDTDISNLAAYYSTMK
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]