| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695517
Identifier: 209695517
GI number: 209695517
Start: 2223705
End: 2224043
Strand: Direct
Name: 209695517
Synonym: VSAL_I2071
Alternate gene names: NA
Gene position: 2223705-2224043 (Clockwise)
Preceding gene: 209695514
Following gene: 209695520
Centisome position: 66.88
GC content: 45.13
Gene sequence:
>339_bases ATGTTTATTCATCATGTTAACGACATCGACTGGCTGGTGATTACCGCTTTTGAAGAACTGAAAACGATGTTTATCGAAGA AGCGGGTGCGATCCCTTCTTGCTTCTCTACCGCCAGCGAATTGAGCCTGATTGATCAAGCCAAGCGTACTTATGGATATT TGCCCACACTCAGCGGCGTAATCACCGATACTGGCACTTTTCAAAGCCAAAATAATGAAGAAGATTTGAACCCACAGCTT GCCTGTCTAGTTGAGGGACGTGGTCGAATATTTATCTATCACGGCGGCTTTGTCGCTTTTGTGGATGACGAGCAAACCTT TATTACCCGAATGGACTGA
Upstream 100 bases:
>100_bases ACAAAAATGGCATAGAATTACTGCCTTTATCAACTAAATCTCTACTACGCACTCCCTTGATAGTGATACAATCTCCGCAT CTGAATTACCGAGAAACTCT
Downstream 100 bases:
>100_bases AAATAGCGGTATTCTTAGACTTAAGTAAGCTAATGTCAGCCCTGACACAGAGGGCTGACATTAGCCTTCAGGCTTTATAT CAAACTCGTCATATAAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGVITDTGTFQSQNNEEDLNPQL ACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD
Sequences:
>Translated_112_residues MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGVITDTGTFQSQNNEEDLNPQL ACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD >Mature_112_residues MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGVITDTGTFQSQNNEEDLNPQL ACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12614; Mature: 12614
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGV CEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE ITDTGTFQSQNNEEDLNPQLACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD EECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEEEECCCEEEEECC >Mature Secondary Structure MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGV CEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE ITDTGTFQSQNNEEDLNPQLACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD EECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA