The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695489

Identifier: 209695489

GI number: 209695489

Start: 2185906

End: 2187207

Strand: Direct

Name: 209695489

Synonym: VSAL_I2040

Alternate gene names: NA

Gene position: 2185906-2187207 (Clockwise)

Preceding gene: 209695478

Following gene: 209695490

Centisome position: 65.74

GC content: 34.95

Gene sequence:

>1302_bases
ATGAATGAACTAAGAAAGTATGCTGCCATTGGTGGTGCTATTGCGATTGTTGCTTGTTGGCCGTTTGCGACAGGAAAAAT
TGGTGAAGCTATATTTAAAGATGGCATTGCCTCTTATGACAATTCTGTTATTAAAATAGAAAATATTTCTTATGACCGTG
GTTATTTAAGTTCACAAGCTCAAAGCCGAGTGTATGTGACCGATAAAGGCTTAATTGCTGAATTAGAGCACGCGGGTTAT
CCAAGTGAAATTATTGTTAATCATGAAATAGACCACGGTTTATTCTCTATTTCATCAACGTCAACGGTGACTGGAGAAGC
GGCGTCTTCTGAATTTATAAAAGGACTGACGCTGACAACAAACAGCCAGTTGACTGGGAAGACAGATCTAGAATTAATAA
GCCAAGATACTAATTTTGTTAATGCAGATTTAAAAGCTCAAGGCGTTGAGAAACTGTATTTAGCGGCAAGTAAAATTTCA
GCGACCATTCATCCAGAAGGTGAATTTTCACTGCAATATAGTCTACCTAAAACTGAATTACGTTTAGAAAATCAATCAGA
TATGCTGATAGATAATGTTTCTGGTAAAAGTGAAGGTAAATATCTAGATGATATTTTTATTGGTGATGCTAATGTGGCTA
TCGATAAAATGACGATCAATGATATTGAAAGTAATATTCATAATGTCGTGAATAATGTGACTTATAGTAGTTCAAATGAA
TTAGCTGAAGTAAAAGATCTTCCTGCTGATAATTCATTAAGTTCTACCAATATTCTAAAATTAGGTGAAGTAACGACTGA
TGCTGGAACGCTAAAAAATGGCGTATTTAATATTAGTTTTGATGACTTGAATTACGATGCACTGATTAAATTAGTTCCAT
TATTACAAGATCAAGAACTCACACCTGAAAAAATTCAACAATTGATGCTTTCGTTTGATTTACTTGCTGCAAAAGGCTTC
AGCATCAATATTAATGAATTTAGTGCTGATGTGTTAGGCAGTAAGGTTGAAAGTAAGGTATTACTAAATTTACCTGCTGG
TACAGCAAGAGCATCGCAAAATGCGGATCAATTGGTTCAAACACTAAAAGGCAATGCAGAGTTAGTTATCGCTAAGAAAT
TGGTTGATGATACACCTGAACTGCGTATGCAAATGGATGAATTGTTGATTAACGAATTTGCAGTTGAAGAGGGTGATAAT
TACCGTCTGGCGGCAACCATTGCAGATGGTCAAATTGAGCTATTAAATGGTCAAAAAATGCCATTGTTTATGCTTCTTGG
TTTGTTAAGTTATTTACGTTAA

Upstream 100 bases:

>100_bases
TAATAATTTTTAATGCAGTAAGAAATTGGATTAAATATGACTGTATTGCGTTCGATGAGTTAGGTAAACTGGTTGAAATC
GTTAAAAAATGGATAATTAA

Downstream 100 bases:

>100_bases
TCGTCATTAATTGAAAGACACAATAGCTCACTTCGGTGGGCTATTTTTTTATCGCTATTTAATTATGGCGGTTATTTAGT
GAATTAGATCACTTTCTGAT

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNELRKYAAIGGAIAIVACWPFATGKIGEAIFKDGIASYDNSVIKIENISYDRGYLSSQAQSRVYVTDKGLIAELEHAGY
PSEIIVNHEIDHGLFSISSTSTVTGEAASSEFIKGLTLTTNSQLTGKTDLELISQDTNFVNADLKAQGVEKLYLAASKIS
ATIHPEGEFSLQYSLPKTELRLENQSDMLIDNVSGKSEGKYLDDIFIGDANVAIDKMTINDIESNIHNVVNNVTYSSSNE
LAEVKDLPADNSLSSTNILKLGEVTTDAGTLKNGVFNISFDDLNYDALIKLVPLLQDQELTPEKIQQLMLSFDLLAAKGF
SININEFSADVLGSKVESKVLLNLPAGTARASQNADQLVQTLKGNAELVIAKKLVDDTPELRMQMDELLINEFAVEEGDN
YRLAATIADGQIELLNGQKMPLFMLLGLLSYLR

Sequences:

>Translated_433_residues
MNELRKYAAIGGAIAIVACWPFATGKIGEAIFKDGIASYDNSVIKIENISYDRGYLSSQAQSRVYVTDKGLIAELEHAGY
PSEIIVNHEIDHGLFSISSTSTVTGEAASSEFIKGLTLTTNSQLTGKTDLELISQDTNFVNADLKAQGVEKLYLAASKIS
ATIHPEGEFSLQYSLPKTELRLENQSDMLIDNVSGKSEGKYLDDIFIGDANVAIDKMTINDIESNIHNVVNNVTYSSSNE
LAEVKDLPADNSLSSTNILKLGEVTTDAGTLKNGVFNISFDDLNYDALIKLVPLLQDQELTPEKIQQLMLSFDLLAAKGF
SININEFSADVLGSKVESKVLLNLPAGTARASQNADQLVQTLKGNAELVIAKKLVDDTPELRMQMDELLINEFAVEEGDN
YRLAATIADGQIELLNGQKMPLFMLLGLLSYLR
>Mature_433_residues
MNELRKYAAIGGAIAIVACWPFATGKIGEAIFKDGIASYDNSVIKIENISYDRGYLSSQAQSRVYVTDKGLIAELEHAGY
PSEIIVNHEIDHGLFSISSTSTVTGEAASSEFIKGLTLTTNSQLTGKTDLELISQDTNFVNADLKAQGVEKLYLAASKIS
ATIHPEGEFSLQYSLPKTELRLENQSDMLIDNVSGKSEGKYLDDIFIGDANVAIDKMTINDIESNIHNVVNNVTYSSSNE
LAEVKDLPADNSLSSTNILKLGEVTTDAGTLKNGVFNISFDDLNYDALIKLVPLLQDQELTPEKIQQLMLSFDLLAAKGF
SININEFSADVLGSKVESKVLLNLPAGTARASQNADQLVQTLKGNAELVIAKKLVDDTPELRMQMDELLINEFAVEEGDN
YRLAATIADGQIELLNGQKMPLFMLLGLLSYLR

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47160; Mature: 47160

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELRKYAAIGGAIAIVACWPFATGKIGEAIFKDGIASYDNSVIKIENISYDRGYLSSQA
CCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCCCC
QSRVYVTDKGLIAELEHAGYPSEIIVNHEIDHGLFSISSTSTVTGEAASSEFIKGLTLTT
CCEEEEECCCCCHHHHHCCCCCEEEEEEECCCCEEEECCCCEECCCCHHHHHHCCEEEEC
NSQLTGKTDLELISQDTNFVNADLKAQGVEKLYLAASKISATIHPEGEFSLQYSLPKTEL
CCCCCCCCCHHEEECCCCEEECCHHHCCHHHHHEEHHHEEEEECCCCCEEEEECCCCHHE
RLENQSDMLIDNVSGKSEGKYLDDIFIGDANVAIDKMTINDIESNIHNVVNNVTYSSSNE
EECCCCCEEEECCCCCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCC
LAEVKDLPADNSLSSTNILKLGEVTTDAGTLKNGVFNISFDDLNYDALIKLVPLLQDQEL
HHHHHCCCCCCCCCCCCEEEECCEECCCCHHCCCEEEEEECCCCHHHHHHHHHHHCCCCC
TPEKIQQLMLSFDLLAAKGFSININEFSADVLGSKVESKVLLNLPAGTARASQNADQLVQ
CHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHH
TLKGNAELVIAKKLVDDTPELRMQMDELLINEFAVEEGDNYRLAATIADGQIELLNGQKM
HHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEECCCCC
PLFMLLGLLSYLR
HHHHHHHHHHHHC
>Mature Secondary Structure
MNELRKYAAIGGAIAIVACWPFATGKIGEAIFKDGIASYDNSVIKIENISYDRGYLSSQA
CCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCCCC
QSRVYVTDKGLIAELEHAGYPSEIIVNHEIDHGLFSISSTSTVTGEAASSEFIKGLTLTT
CCEEEEECCCCCHHHHHCCCCCEEEEEEECCCCEEEECCCCEECCCCHHHHHHCCEEEEC
NSQLTGKTDLELISQDTNFVNADLKAQGVEKLYLAASKISATIHPEGEFSLQYSLPKTEL
CCCCCCCCCHHEEECCCCEEECCHHHCCHHHHHEEHHHEEEEECCCCCEEEEECCCCHHE
RLENQSDMLIDNVSGKSEGKYLDDIFIGDANVAIDKMTINDIESNIHNVVNNVTYSSSNE
EECCCCCEEEECCCCCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCC
LAEVKDLPADNSLSSTNILKLGEVTTDAGTLKNGVFNISFDDLNYDALIKLVPLLQDQEL
HHHHHCCCCCCCCCCCCEEEECCEECCCCHHCCCEEEEEECCCCHHHHHHHHHHHCCCCC
TPEKIQQLMLSFDLLAAKGFSININEFSADVLGSKVESKVLLNLPAGTARASQNADQLVQ
CHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHH
TLKGNAELVIAKKLVDDTPELRMQMDELLINEFAVEEGDNYRLAATIADGQIELLNGQKM
HHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEECCCCC
PLFMLLGLLSYLR
HHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA