Click here to switch to the map view.

The map label for this gene is 209695478

Identifier: 209695478

GI number: 209695478

Start: 2173803

End: 2175005

Strand: Direct

Name: 209695478

Synonym: VSAL_I2028

Alternate gene names: NA

Gene position: 2173803-2175005 (Clockwise)

Preceding gene: 209695476

Following gene: 209695489

Centisome position: 65.37

GC content: 43.06

Gene sequence:

>1203_bases
ATGATCATCAAACCTAGAATTCGTGGATTCATTTGTACAACCACTCACCCTGTTGGTTGTGAGCACAACGTGAAAGAACA
AATTGCCCTGACTAAAGCACAAGGCCCAATTGCTAATGCACCAAAACGTGTATTGGTTGTTGGTTCTTCAAGTGGCTATG
GTCTTTCTTCTCGCATCACTGCAGCATTTGGTGGCGGTGCGTCAACTATCGGTGTTTTCTTTGAAAAAGCAGCGACAGAG
AAAAAAACAGGCACTGCAGGCTGGTATAACTCAGCTGCGTTCGATAAGTTTGCAAAAGAAGAAGGCCTTTATTCTAAAAG
TCTGAATGGTGATGCTTTCTCTGATGAAGCAAAACAAAAAACCATCGATCTAATCAAAGAAGACTTAGGTCAGATTGATA
TGGTGGTTTACTCTCTTGCATCACCTGTACGTAAAATGCCAGAAACAGGTGAGGTGATTCGTTCTTCACTCAAGCCAATT
GGTAATACGTATACAGCAACAGCGGTTGATACAAATAAAGATGCAATTATTGAAGCGTCTGTAGAACCAGCAACAGAGCA
AGAGATCCAAGACACTATTACCGTCATGGGCGGTGAAGATTGGGAATTATGGATGAGCGCATTATCTGATGCGGGCGTTC
TGGCTGATGGTTGTAAGACCGTTGCTTACAGCTACATCGGTACTGAGCTAACATGGCCTATCTATTGGGATGGCGCGTTA
GGTAAAGCTAAGATGGATTTAGATCGTGCAGCGACAACGCTAAACGAGAAACTATCTGCAACTGGCGGTACTGCAAACGT
AGCAGTCCTTAAGTCGGTAGTAACTCAAGCAAGTTCTGCGATTCCTGTTATGCCTCTTTATATCGCTATGGTATTTAAGA
AGATGCGTGAAGAGGGTGTTCATGAAGGATGCCAAGAGCAAATCCTACGTATGTTCAGCCAACGTTTATACAGAGAAGAT
GGTTCAGCACCTGAAGTGGATGATCAAAACCGTCTGCGTTTAGATGACTGGGAACTTCGTGAAGATATCCAGAAGCATTG
CCGTGAGTTATGGCCTCAAGTGACAACTGAGAACCTAAAGGACTTAACCGATTATGTTGAGTACAAAGAAGAGTTCTTAA
AACTGTTTGGTTTTGGCGTTGATGGTGTTGATTACGACGTTGACGTAAACCCTCTTGTTGAGTTTGATGTAGCTGATATC
TAA

Upstream 100 bases:

>100_bases
TCCAACCACTCACTATTTTGACAAAAATTGTCATAAATGGGATGCGAACTGGATAAGAACCTTTTATCCTAGAAGGTAAT
TATTAAAAGGAAAGTTGAAC

Downstream 100 bases:

>100_bases
TACTAACGCCAATAAGCATTTTATCATTCTTGCTTGTTACCATTAGTAAATAGAAGACAAAATAAAACCCCAGAGTGAAT
TATCATTCTGGGGTTTTTTA

Product: trans-2-enoyl-CoA reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MIIKPRIRGFICTTTHPVGCEHNVKEQIALTKAQGPIANAPKRVLVVGSSSGYGLSSRITAAFGGGASTIGVFFEKAATE
KKTGTAGWYNSAAFDKFAKEEGLYSKSLNGDAFSDEAKQKTIDLIKEDLGQIDMVVYSLASPVRKMPETGEVIRSSLKPI
GNTYTATAVDTNKDAIIEASVEPATEQEIQDTITVMGGEDWELWMSALSDAGVLADGCKTVAYSYIGTELTWPIYWDGAL
GKAKMDLDRAATTLNEKLSATGGTANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGVHEGCQEQILRMFSQRLYRED
GSAPEVDDQNRLRLDDWELREDIQKHCRELWPQVTTENLKDLTDYVEYKEEFLKLFGFGVDGVDYDVDVNPLVEFDVADI

Sequences:

>Translated_400_residues
MIIKPRIRGFICTTTHPVGCEHNVKEQIALTKAQGPIANAPKRVLVVGSSSGYGLSSRITAAFGGGASTIGVFFEKAATE
KKTGTAGWYNSAAFDKFAKEEGLYSKSLNGDAFSDEAKQKTIDLIKEDLGQIDMVVYSLASPVRKMPETGEVIRSSLKPI
GNTYTATAVDTNKDAIIEASVEPATEQEIQDTITVMGGEDWELWMSALSDAGVLADGCKTVAYSYIGTELTWPIYWDGAL
GKAKMDLDRAATTLNEKLSATGGTANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGVHEGCQEQILRMFSQRLYRED
GSAPEVDDQNRLRLDDWELREDIQKHCRELWPQVTTENLKDLTDYVEYKEEFLKLFGFGVDGVDYDVDVNPLVEFDVADI
>Mature_400_residues
MIIKPRIRGFICTTTHPVGCEHNVKEQIALTKAQGPIANAPKRVLVVGSSSGYGLSSRITAAFGGGASTIGVFFEKAATE
KKTGTAGWYNSAAFDKFAKEEGLYSKSLNGDAFSDEAKQKTIDLIKEDLGQIDMVVYSLASPVRKMPETGEVIRSSLKPI
GNTYTATAVDTNKDAIIEASVEPATEQEIQDTITVMGGEDWELWMSALSDAGVLADGCKTVAYSYIGTELTWPIYWDGAL
GKAKMDLDRAATTLNEKLSATGGTANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGVHEGCQEQILRMFSQRLYRED
GSAPEVDDQNRLRLDDWELREDIQKHCRELWPQVTTENLKDLTDYVEYKEEFLKLFGFGVDGVDYDVDVNPLVEFDVADI

Specific function: Probable reductase

COG id: COG3007

COG function: function code S; Uncharacterized paraquat-inducible protein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TER reductase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2028_ALISL (B6EHQ2)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002263407.1
- GeneID:   6987524
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I2028
- HOGENOM:   HBG288357
- OMA:   WELWINA
- ProtClustDB:   PRK13656
- HAMAP:   MF_01838
- InterPro:   IPR010758

Pfam domain/function: PF07055 scADH

EC number: NA

Molecular weight: Translated: 43947; Mature: 43947

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKPRIRGFICTTTHPVGCEHNVKEQIALTKAQGPIANAPKRVLVVGSSSGYGLSSRIT
CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHH
AAFGGGASTIGVFFEKAATEKKTGTAGWYNSAAFDKFAKEEGLYSKSLNGDAFSDEAKQK
EEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCHHHHHH
TIDLIKEDLGQIDMVVYSLASPVRKMPETGEVIRSSLKPIGNTYTATAVDTNKDAIIEAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEC
VEPATEQEIQDTITVMGGEDWELWMSALSDAGVLADGCKTVAYSYIGTELTWPIYWDGAL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC
GKAKMDLDRAATTLNEKLSATGGTANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGV
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
HEGCQEQILRMFSQRLYREDGSAPEVDDQNRLRLDDWELREDIQKHCRELWPQVTTENLK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
DLTDYVEYKEEFLKLFGFGVDGVDYDVDVNPLVEFDVADI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIIKPRIRGFICTTTHPVGCEHNVKEQIALTKAQGPIANAPKRVLVVGSSSGYGLSSRIT
CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHH
AAFGGGASTIGVFFEKAATEKKTGTAGWYNSAAFDKFAKEEGLYSKSLNGDAFSDEAKQK
EEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCHHHHHH
TIDLIKEDLGQIDMVVYSLASPVRKMPETGEVIRSSLKPIGNTYTATAVDTNKDAIIEAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEC
VEPATEQEIQDTITVMGGEDWELWMSALSDAGVLADGCKTVAYSYIGTELTWPIYWDGAL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC
GKAKMDLDRAATTLNEKLSATGGTANVAVLKSVVTQASSAIPVMPLYIAMVFKKMREEGV
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
HEGCQEQILRMFSQRLYREDGSAPEVDDQNRLRLDDWELREDIQKHCRELWPQVTTENLK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
DLTDYVEYKEEFLKLFGFGVDGVDYDVDVNPLVEFDVADI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA