| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695283
Identifier: 209695283
GI number: 209695283
Start: 1931745
End: 1932872
Strand: Direct
Name: 209695283
Synonym: VSAL_I1808
Alternate gene names: NA
Gene position: 1931745-1932872 (Clockwise)
Preceding gene: 209695282
Following gene: 209695284
Centisome position: 58.09
GC content: 42.29
Gene sequence:
>1128_bases ATGACAAATACAAATATCCAACTTATTTCAACAATTAGCGAAGACAATAAGCTCACGCTTTCCCTACAAGACATCGACAT GCCACAACCTAATGCCGATGAAGTCGTTATTCGCATTGAAGCTGCCCCATTAAACCCATCTGATTTAGGCGTTTTATTCA GTGCCGCTGATATGACTACCGCAGAGCAATCAGGCACAACTCAACATCCTGTGATTACCGCTGATGTTCCTGCTCAGTTT ATGCCATCGCTTGCAAAGCGTGTGGGTAAAGCAATTCCTGTTGGGAATGAAGGCGCAGGAACCGTTATAGCCGCGGGATC ATCACCTGCAGCACAAGCGTTAATGGGTAAAACCGTTGCGGTAATTGGCGGCGGAACTTACCGTCAATTTATCTGTGCTA ATGTGCAAAGCTGCTTAGAATTAAAAGAAGGCACGACAGCGAAAGAAGGCGCATCGTCTTTTGTTAACCCACTTACTGCA TTAGCTATGGTAGAAACAATGCGTGCCGAAGGCCATAAAGCCATTATTCATGCCGCCGCGGCGTCTAATCTTGGTCAAAT GTTAAACCGTATTTGTATTGCCGATAACGTCGATTTAATTAACATTGTACGTAAAGAAGAACAAGAAACACTATTACAAG ATATGGGCGCAAAATACATTGTTAACTCAAGCAGTGAAACTTTCCTTGCTGATTTAACGGCTGCGATTATTGAAACGGGT GCAACGATTGCGTTTGATCCCATTGGTGGCGGTCAATTAACCAGTGATATTCTTAACTGCATGGAAGTTGCTGCGGCTCG TGATATGAAAGAACACAGCGTTTATGGTTCTGACACTTTCAAACAAGTGTATATTTATGGCGCATTAAACCGTGGCCCTA TTACTTTACATCGTAATTTTGGTTTTGCTTGGGGTGTCAATGGATTCTTACTATTCAATGCCTTAGGTAAATTAGGGACG ACAACAGCAATAGCAATGCGTAAACGTGTTGCAGATGAAATCACCACCACATTTGCTAGTAACTACACACATGAAGTGTC ATTAGCTGAAGTATTACAATTACAATCATTGGCCGCTTATTCTAAACAAGCGACAGGTGAAAAGTACTTAATTACGCCTC AGAAATAG
Upstream 100 bases:
>100_bases CCAATACGAAATGTCTACTTGAATTCAGCTACGAACACACTATGGTCAATGCAGCCACCTTATTGACTCAACAAATTTAC TTCTTTGCCGGAGAAACCTC
Downstream 100 bases:
>100_bases ACGTAAGCGTGCGGGGAACTACACCTAACAAATAAAATTCATTATGCGTATCTTACGATCTTTCATTTAACGAGAACGTA ATTATGCAAAAAGATAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Alcohol Dehydrogenase GroES Domain Protein; Alcohol Dehydrogenase; Alcohol Dehydrogenase GroES-Like Protein; NADPHQuinone Reductase; Alcohol Dehydrogenase GroES-Like Domain Family; Zn-Dependent; Alcohol Dehydrogenase GroES Domain-Containing Protein; NADH Oxidoreductas; Zn-Dependent Alcohol Dehydrogenase; Trans-2-Enoyl-CoA Reductase; Alcohol Dehydrogenase-Like Protein; Zn-Dependent Oxidoreductase; NADH Oxidoreductase-Like
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTTAEQSGTTQHPVITADVPAQF MPSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVAVIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTA LAMVETMRAEGHKAIIHAAAASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETG ATIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNFGFAWGVNGFLLFNALGKLGT TTAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAYSKQATGEKYLITPQK
Sequences:
>Translated_375_residues MTNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTTAEQSGTTQHPVITADVPAQF MPSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVAVIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTA LAMVETMRAEGHKAIIHAAAASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETG ATIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNFGFAWGVNGFLLFNALGKLGT TTAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAYSKQATGEKYLITPQK >Mature_374_residues TNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTTAEQSGTTQHPVITADVPAQFM PSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVAVIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTAL AMVETMRAEGHKAIIHAAAASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETGA TIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNFGFAWGVNGFLLFNALGKLGTT TAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAYSKQATGEKYLITPQK
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39804; Mature: 39673
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTT CCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC AEQSGTTQHPVITADVPAQFMPSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVA HHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEE VIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTALAMVETMRAEGHKAIIHAAA EEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH ASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCC ATIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNF CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECC GFAWGVNGFLLFNALGKLGTTTAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAY CEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SKQATGEKYLITPQK HHHCCCCEEEECCCC >Mature Secondary Structure TNTNIQLISTISEDNKLTLSLQDIDMPQPNADEVVIRIEAAPLNPSDLGVLFSAADMTT CCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCC AEQSGTTQHPVITADVPAQFMPSLAKRVGKAIPVGNEGAGTVIAAGSSPAAQALMGKTVA HHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEE VIGGGTYRQFICANVQSCLELKEGTTAKEGASSFVNPLTALAMVETMRAEGHKAIIHAAA EEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH ASNLGQMLNRICIADNVDLINIVRKEEQETLLQDMGAKYIVNSSSETFLADLTAAIIETG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCC ATIAFDPIGGGQLTSDILNCMEVAAARDMKEHSVYGSDTFKQVYIYGALNRGPITLHRNF CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECC GFAWGVNGFLLFNALGKLGTTTAIAMRKRVADEITTTFASNYTHEVSLAEVLQLQSLAAY CEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SKQATGEKYLITPQK HHHCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA