Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695282

Identifier: 209695282

GI number: 209695282

Start: 1930948

End: 1931625

Strand: Direct

Name: 209695282

Synonym: VSAL_I1807

Alternate gene names: NA

Gene position: 1930948-1931625 (Clockwise)

Preceding gene: 209695277

Following gene: 209695283

Centisome position: 58.07

GC content: 40.41

Gene sequence:

>678_bases
ATGATTATTTTGCACGGTTTTGCCGCTAGTAACTATTACAACCTAGTGAAACATGTACTTCTATACAAGCAACTGCCATT
CCAAGAAAATCTCATTTACGGTGGTAGTGATGAGCTATTAACAATCAGTCCTGCGGGAAAAGTACCTGCTATAACAACGC
AAGAAGGCCTTCATCTTTCAGAGTCGAGTGTTATTTGTGATTTTATAGAAGAGACATTCCCTGCGACTCCGCTATACCCT
GAAAATGCAGGCGAACGTGCAGTTATTCGTCAAATAATGAACATAGCAGAGCTTTATTTGGAATTACCAAGCAGACGATT
TATACCCTATGTATTGTCAGGTACTGACGTTCCAGAACCCGTTAAAGCCGAAGTACGCCAAGTATTAACACGTGGAGTCA
CAGCCTTAAGTAGTTTGTGTCAATTCACGCCTTGGATTGCAGGTGAAGAATTAACGATGGCTGATATCTACGTTTATTAT
ATCAACATCATTGTAAGCACTTTTGGTTCTAGCCAACTTGACTGGGACATACTTGCAGAAGTACCAGGAATGAAAGCATG
GAACGATTCTATGAGCCAGTCGATCATTGCTCAAAACGTAGAAGTCGATCGCCAGGCAAACATCCCTGAATTTACCCAAA
AAATAAAAGCTCAAATTCAAGCAGCAAAGACTAAATAA

Upstream 100 bases:

>100_bases
AGTGATTCACGTTTTACCTTATATATAACCGGATTAAAACAAGTAATAATACGTTTAACTTACACATTGCACCCTTCACG
TTAATGATGGAAAACTGATT

Downstream 100 bases:

>100_bases
TACGTAGTGACAAAAACAACCAATACGAAATGTCTACTTGAATTCAGCTACGAACACACTATGGTCAATGCAGCCACCTT
ATTGACTCAACAAATTTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLSESSVICDFIEETFPATPLYP
ENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEPVKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYY
INIIVSTFGSSQLDWDILAEVPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK

Sequences:

>Translated_225_residues
MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLSESSVICDFIEETFPATPLYP
ENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEPVKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYY
INIIVSTFGSSQLDWDILAEVPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK
>Mature_225_residues
MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLSESSVICDFIEETFPATPLYP
ENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEPVKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYY
INIIVSTFGSSQLDWDILAEVPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK

Specific function: Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: =2.5.1.18 [H]

Molecular weight: Translated: 25115; Mature: 25115

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLS
CEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCCCEEECCCCCCCC
ESSVICDFIEETFPATPLYPENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEP
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCH
VKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYYINIIVSTFGSSQLDWDILAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
VPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLS
CEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCCCEEECCCCCCCC
ESSVICDFIEETFPATPLYPENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEP
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCH
VKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYYINIIVSTFGSSQLDWDILAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
VPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11900268 [H]