| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is 209695282
Identifier: 209695282
GI number: 209695282
Start: 1930948
End: 1931625
Strand: Direct
Name: 209695282
Synonym: VSAL_I1807
Alternate gene names: NA
Gene position: 1930948-1931625 (Clockwise)
Preceding gene: 209695277
Following gene: 209695283
Centisome position: 58.07
GC content: 40.41
Gene sequence:
>678_bases ATGATTATTTTGCACGGTTTTGCCGCTAGTAACTATTACAACCTAGTGAAACATGTACTTCTATACAAGCAACTGCCATT CCAAGAAAATCTCATTTACGGTGGTAGTGATGAGCTATTAACAATCAGTCCTGCGGGAAAAGTACCTGCTATAACAACGC AAGAAGGCCTTCATCTTTCAGAGTCGAGTGTTATTTGTGATTTTATAGAAGAGACATTCCCTGCGACTCCGCTATACCCT GAAAATGCAGGCGAACGTGCAGTTATTCGTCAAATAATGAACATAGCAGAGCTTTATTTGGAATTACCAAGCAGACGATT TATACCCTATGTATTGTCAGGTACTGACGTTCCAGAACCCGTTAAAGCCGAAGTACGCCAAGTATTAACACGTGGAGTCA CAGCCTTAAGTAGTTTGTGTCAATTCACGCCTTGGATTGCAGGTGAAGAATTAACGATGGCTGATATCTACGTTTATTAT ATCAACATCATTGTAAGCACTTTTGGTTCTAGCCAACTTGACTGGGACATACTTGCAGAAGTACCAGGAATGAAAGCATG GAACGATTCTATGAGCCAGTCGATCATTGCTCAAAACGTAGAAGTCGATCGCCAGGCAAACATCCCTGAATTTACCCAAA AAATAAAAGCTCAAATTCAAGCAGCAAAGACTAAATAA
Upstream 100 bases:
>100_bases AGTGATTCACGTTTTACCTTATATATAACCGGATTAAAACAAGTAATAATACGTTTAACTTACACATTGCACCCTTCACG TTAATGATGGAAAACTGATT
Downstream 100 bases:
>100_bases TACGTAGTGACAAAAACAACCAATACGAAATGTCTACTTGAATTCAGCTACGAACACACTATGGTCAATGCAGCCACCTT ATTGACTCAACAAATTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLSESSVICDFIEETFPATPLYP ENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEPVKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYY INIIVSTFGSSQLDWDILAEVPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK
Sequences:
>Translated_225_residues MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLSESSVICDFIEETFPATPLYP ENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEPVKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYY INIIVSTFGSSQLDWDILAEVPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK >Mature_225_residues MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLSESSVICDFIEETFPATPLYP ENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEPVKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYY INIIVSTFGSSQLDWDILAEVPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK
Specific function: Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: =2.5.1.18 [H]
Molecular weight: Translated: 25115; Mature: 25115
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLS CEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCCCEEECCCCCCCC ESSVICDFIEETFPATPLYPENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEP CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCH VKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYYINIIVSTFGSSQLDWDILAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHC VPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIILHGFAASNYYNLVKHVLLYKQLPFQENLIYGGSDELLTISPAGKVPAITTQEGLHLS CEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCCCEEECCCCCCCC ESSVICDFIEETFPATPLYPENAGERAVIRQIMNIAELYLELPSRRFIPYVLSGTDVPEP CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCH VKAEVRQVLTRGVTALSSLCQFTPWIAGEELTMADIYVYYINIIVSTFGSSQLDWDILAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHC VPGMKAWNDSMSQSIIAQNVEVDRQANIPEFTQKIKAQIQAAKTK CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11900268 [H]