| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is tyrP [H]
Identifier: 209695252
GI number: 209695252
Start: 1891303
End: 1892475
Strand: Direct
Name: tyrP [H]
Synonym: VSAL_I1774
Alternate gene names: 209695252
Gene position: 1891303-1892475 (Clockwise)
Preceding gene: 209695250
Following gene: 209695253
Centisome position: 56.88
GC content: 38.19
Gene sequence:
>1173_bases ATGAAGTCAAAAGTATTCGGAAGTTCACTTATAATTGCAGGAACGACCATCGGTGCAGGCATGCTAGCCTTGCCATTAGT CTCGGCAAGTCTTGGATTCTTTACAGCAAGTGTATTAATGATAGCCATTTGGGCAGTGATGAGCTATACGAGTTTGCTGA TGCTAGAAGTTCATCAGCACAGTGATCGTTCAGCAACATTGCATAGCTTAGCTTTGCAGTTTCTGGGAAAGAATGGACAA CGACTGGCTACCTTTTCGATGCTTTTTCTTTTTTACGCTTTATGTGCCGCTTACATTGCCGGAGGCAGTGAGCAATTTCA CACCAAAATTAATCAACTCTCTTTTATTTCATTATCGAAAACGAGTTCAACGATTCTATTCACCCTTATTATCGCGTTCA TTATTTCACTAGGCACAAAAACCGTCGATTTTATTAATCGTGGGTTATTTAGCTTAAAAATCGTAATGCTAATTGCGATA CTCTTCTTCTTAACCCCGAATATTAGTGGCGAGTACTTATTAGCATTACCGGTTGAACAAGGCGTTTTCATTACGGCTTT ACCTGTAGTGTTTACCTCTTTTGGTTTCCACGGAAGTATTCCTTCGATAGTGAAATACTTAGAACTTGATATTAAGAAAA TTAAAATCAGTTTATTGGTTGGATCATCAATTCCACTTGTCATTTACCTTTTTTGGCAAGGCATTACACTTGGTCTATTG TCGCAAAGTGAATTCTCAACGATAAATAGCTTAACCGCCTTTATAACGACGATTCAAAACTCGATAGATAAAGCTTACAT TCAACAAGCCTTGTCCTTATTTGCCGATCTCGCTTTGATCACGTCATTTATAGGAGTCAGTCTTGGATTGTTTGACTTTT TACGTGATTCATCTAAAAAATGGCAACAATCTACCATTATTACGGCATTACTAACTTACACTCCTCCCTTGTTATTTGCT TTGTTTTATCCACAAGGATTTATTATGGCACTAGGGTATGCCGCTATTGCACTTGTTATTTTAGCGTTATTTTTGCCTGT TGCTTTGGTTGTTTCTGCACGAAAAGTACATACAGGCACTCATTACCAAGTAGCAAGTAAGAACTTGGGGTTAATCGTAG CGGTCATCCTTGGAATAACAATAATTGGCTGCCAAATAGTGGTATCACTCTAA
Upstream 100 bases:
>100_bases CACCTAGTGTATTCTTATTATTACAATAATTTGAATTAGAGATAAATAGGCAGTACATTCGCATCACTAACAAAGTATTA CAGAAGAAAAGAGACAGTCT
Downstream 100 bases:
>100_bases ATATAATGACTAATAATAGTTTTATTAATTGAAGTCTGAACTATCATTAAAAGTTATAAACACTCGTTTTTATGAGTGTT TTTACTTTTATGTTTTGCAT
Product: tyrosine-specific transport protein (tyrosine permease)
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKSKVFGSSLIIAGTTIGAGMLALPLVSASLGFFTASVLMIAIWAVMSYTSLLMLEVHQHSDRSATLHSLALQFLGKNGQ RLATFSMLFLFYALCAAYIAGGSEQFHTKINQLSFISLSKTSSTILFTLIIAFIISLGTKTVDFINRGLFSLKIVMLIAI LFFLTPNISGEYLLALPVEQGVFITALPVVFTSFGFHGSIPSIVKYLELDIKKIKISLLVGSSIPLVIYLFWQGITLGLL SQSEFSTINSLTAFITTIQNSIDKAYIQQALSLFADLALITSFIGVSLGLFDFLRDSSKKWQQSTIITALLTYTPPLLFA LFYPQGFIMALGYAAIALVILALFLPVALVVSARKVHTGTHYQVASKNLGLIVAVILGITIIGCQIVVSL
Sequences:
>Translated_390_residues MKSKVFGSSLIIAGTTIGAGMLALPLVSASLGFFTASVLMIAIWAVMSYTSLLMLEVHQHSDRSATLHSLALQFLGKNGQ RLATFSMLFLFYALCAAYIAGGSEQFHTKINQLSFISLSKTSSTILFTLIIAFIISLGTKTVDFINRGLFSLKIVMLIAI LFFLTPNISGEYLLALPVEQGVFITALPVVFTSFGFHGSIPSIVKYLELDIKKIKISLLVGSSIPLVIYLFWQGITLGLL SQSEFSTINSLTAFITTIQNSIDKAYIQQALSLFADLALITSFIGVSLGLFDFLRDSSKKWQQSTIITALLTYTPPLLFA LFYPQGFIMALGYAAIALVILALFLPVALVVSARKVHTGTHYQVASKNLGLIVAVILGITIIGCQIVVSL >Mature_390_residues MKSKVFGSSLIIAGTTIGAGMLALPLVSASLGFFTASVLMIAIWAVMSYTSLLMLEVHQHSDRSATLHSLALQFLGKNGQ RLATFSMLFLFYALCAAYIAGGSEQFHTKINQLSFISLSKTSSTILFTLIIAFIISLGTKTVDFINRGLFSLKIVMLIAI LFFLTPNISGEYLLALPVEQGVFITALPVVFTSFGFHGSIPSIVKYLELDIKKIKISLLVGSSIPLVIYLFWQGITLGLL SQSEFSTINSLTAFITTIQNSIDKAYIQQALSLFADLALITSFIGVSLGLFDFLRDSSKKWQQSTIITALLTYTPPLLFA LFYPQGFIMALGYAAIALVILALFLPVALVVSARKVHTGTHYQVASKNLGLIVAVILGITIIGCQIVVSL
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=398, Percent_Identity=45.2261306532663, Blast_Score=340, Evalue=9e-95, Organism=Escherichia coli, GI1790145, Length=406, Percent_Identity=31.7733990147783, Blast_Score=154, Evalue=7e-39, Organism=Escherichia coli, GI1789552, Length=354, Percent_Identity=27.683615819209, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 42236; Mature: 42236
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKVFGSSLIIAGTTIGAGMLALPLVSASLGFFTASVLMIAIWAVMSYTSLLMLEVHQH CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SDRSATLHSLALQFLGKNGQRLATFSMLFLFYALCAAYIAGGSEQFHTKINQLSFISLSK CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECC TSSTILFTLIIAFIISLGTKTVDFINRGLFSLKIVMLIAILFFLTPNISGEYLLALPVEQ CCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC GVFITALPVVFTSFGFHGSIPSIVKYLELDIKKIKISLLVGSSIPLVIYLFWQGITLGLL CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHC SQSEFSTINSLTAFITTIQNSIDKAYIQQALSLFADLALITSFIGVSLGLFDFLRDSSKK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH WQQSTIITALLTYTPPLLFALFYPQGFIMALGYAAIALVILALFLPVALVVSARKVHTGT HHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HYQVASKNLGLIVAVILGITIIGCQIVVSL CEEECCCCCHHHHHHHHHHHHHHHHHEEEC >Mature Secondary Structure MKSKVFGSSLIIAGTTIGAGMLALPLVSASLGFFTASVLMIAIWAVMSYTSLLMLEVHQH CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SDRSATLHSLALQFLGKNGQRLATFSMLFLFYALCAAYIAGGSEQFHTKINQLSFISLSK CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECC TSSTILFTLIIAFIISLGTKTVDFINRGLFSLKIVMLIAILFFLTPNISGEYLLALPVEQ CCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC GVFITALPVVFTSFGFHGSIPSIVKYLELDIKKIKISLLVGSSIPLVIYLFWQGITLGLL CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHC SQSEFSTINSLTAFITTIQNSIDKAYIQQALSLFADLALITSFIGVSLGLFDFLRDSSKK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH WQQSTIITALLTYTPPLLFALFYPQGFIMALGYAAIALVILALFLPVALVVSARKVHTGT HHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HYQVASKNLGLIVAVILGITIIGCQIVVSL CEEECCCCCHHHHHHHHHHHHHHHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]