Click here to switch to the map view.

The map label for this gene is yeiJ [C]

Identifier: 209695090

GI number: 209695090

Start: 1697451

End: 1698671

Strand: Direct

Name: yeiJ [C]

Synonym: VSAL_I1587

Alternate gene names: 209695090

Gene position: 1697451-1698671 (Clockwise)

Preceding gene: 209695089

Following gene: 209695098

Centisome position: 51.05

GC content: 41.03

Gene sequence:

>1221_bases
GTGGACTTTCTGGTCAGTATTTTAGGCATTATTAGCCTTTTTACGGTTGCATTTCTTTTTTCTGAAAATCGACAAGCGAT
TAAGTGGCGCACAGTCTTAGGTGCTTTCTTTATTCAAATCTTGTTTGCCGGTTTCATTCTTTATGTTCCTATCGGTCGCA
CCATTTTAAACGGCATATCTACTGCAGTTTCAGATATCATTGCTTATGGCCGCGTTGGAACTGAATTCTTATTTGGTGAC
TTAGCACAATATAAATTAGGTTTTATTTTTGCGGTTAACGTTTTACCAACGATTGTTTTTTTCTCTGCGTTAATTTCTGT
GTTGTACTACCTTGGTATCATGGGATGGATAATTAAAACCATCGGTGGCGGGTTACATCGCTTTCTTGGAACCACACGTA
CAGAATCAATGTCAGCTACCGCAAATATCTTTGTTGGCTCTGTTGAAGCGCCTTTAGTTGTACGCCCTTTCCTTGCAAAA
ATGTCGCGTTCTGAATTATTTGCTGTAATGGTCGGTGGTCTCGCCTCTGTCGCTGGTGGCACAATGGTTGGTTACGCAGG
TTTAGGCGTTGAGTTGCGCTATTTAATTGCAGCGAGCTTTATGTCAGCACCCGCTGGTTTAATGATGGCAAAATTAATTG
TTCCTCAAACTGAAGAGATTGATGAGTCTACGCAGTACGAAGAAGAAACCCCTGATGATGCACCAGTAAATATCATTGAT
GCCGCCTCTCAGGGCGCGTTAAATGGATTACAAATCGTATTTGCTGTTGGTGCCAGTCTATTGGCTATTATTAGCCTTAT
CGCTCTATTGAACGGTGGATTACATAAGATTGGGATACTGATTGGATTTGACCATTTAAGCTTAGATCTTATCTTTGGCT
ATTTGTTTGCCCCTGTTGCTTGGTTAATTGGTGTTCCTTGGTCTGAATCCATGGTGGCTGCAAGTTTAATCGGTAAAAAG
ATTGCCATTAATGAATTTGTTGCCTTTGCGGATTTAATGACAGTCAAAGATCAATTAAGTGAACATTCGCAAGCTATCGT
AACGTTCGCTCTATGTGGTTTTGCTAACTTAACGTCTATTGCGATGTTAATGGGAGGATTAGGCGGTATTGTTCCAAGCC
GTCGCCCAGATATTGCACGGTTAGGCATGAAAGCTATTTTTGCAGCAACATTAGCAAACTTAATGAGTGCCACAGTTGCA
GGCATCTTCTTGTCTTTCTAA

Upstream 100 bases:

>100_bases
CTCTTATGTACGATCAATAACAACTTGATCCTTGTCACACTTTTATTTTTGACTAGAATACCTTCGCAATCATTACACTA
GTTATTATTGGAGTTTGGCT

Downstream 100 bases:

>100_bases
TCTCACCTCTATGTAAATCATAAAAAAGACACCCTATTCGCGGTGTCTTTTTTTATCTACTACATATAAATAGCGAGATA
TTAAAGCTTTGTCATCTCAT

Product: sodium-dependent nucleoside transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDFLVSILGIISLFTVAFLFSENRQAIKWRTVLGAFFIQILFAGFILYVPIGRTILNGISTAVSDIIAYGRVGTEFLFGD
LAQYKLGFIFAVNVLPTIVFFSALISVLYYLGIMGWIIKTIGGGLHRFLGTTRTESMSATANIFVGSVEAPLVVRPFLAK
MSRSELFAVMVGGLASVAGGTMVGYAGLGVELRYLIAASFMSAPAGLMMAKLIVPQTEEIDESTQYEEETPDDAPVNIID
AASQGALNGLQIVFAVGASLLAIISLIALLNGGLHKIGILIGFDHLSLDLIFGYLFAPVAWLIGVPWSESMVAASLIGKK
IAINEFVAFADLMTVKDQLSEHSQAIVTFALCGFANLTSIAMLMGGLGGIVPSRRPDIARLGMKAIFAATLANLMSATVA
GIFLSF

Sequences:

>Translated_406_residues
MDFLVSILGIISLFTVAFLFSENRQAIKWRTVLGAFFIQILFAGFILYVPIGRTILNGISTAVSDIIAYGRVGTEFLFGD
LAQYKLGFIFAVNVLPTIVFFSALISVLYYLGIMGWIIKTIGGGLHRFLGTTRTESMSATANIFVGSVEAPLVVRPFLAK
MSRSELFAVMVGGLASVAGGTMVGYAGLGVELRYLIAASFMSAPAGLMMAKLIVPQTEEIDESTQYEEETPDDAPVNIID
AASQGALNGLQIVFAVGASLLAIISLIALLNGGLHKIGILIGFDHLSLDLIFGYLFAPVAWLIGVPWSESMVAASLIGKK
IAINEFVAFADLMTVKDQLSEHSQAIVTFALCGFANLTSIAMLMGGLGGIVPSRRPDIARLGMKAIFAATLANLMSATVA
GIFLSF
>Mature_406_residues
MDFLVSILGIISLFTVAFLFSENRQAIKWRTVLGAFFIQILFAGFILYVPIGRTILNGISTAVSDIIAYGRVGTEFLFGD
LAQYKLGFIFAVNVLPTIVFFSALISVLYYLGIMGWIIKTIGGGLHRFLGTTRTESMSATANIFVGSVEAPLVVRPFLAK
MSRSELFAVMVGGLASVAGGTMVGYAGLGVELRYLIAASFMSAPAGLMMAKLIVPQTEEIDESTQYEEETPDDAPVNIID
AASQGALNGLQIVFAVGASLLAIISLIALLNGGLHKIGILIGFDHLSLDLIFGYLFAPVAWLIGVPWSESMVAASLIGKK
IAINEFVAFADLMTVKDQLSEHSQAIVTFALCGFANLTSIAMLMGGLGGIVPSRRPDIARLGMKAIFAATLANLMSATVA
GIFLSF

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI227116277, Length=414, Percent_Identity=34.2995169082126, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI42542381, Length=418, Percent_Identity=36.6028708133971, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI11545853, Length=419, Percent_Identity=37.9474940334129, Blast_Score=261, Evalue=9e-70,
Organism=Escherichia coli, GI1788485, Length=416, Percent_Identity=43.75, Blast_Score=342, Evalue=3e-95,
Organism=Escherichia coli, GI1788488, Length=416, Percent_Identity=43.2692307692308, Blast_Score=321, Evalue=6e-89,
Organism=Escherichia coli, GI1788737, Length=389, Percent_Identity=29.0488431876607, Blast_Score=174, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI71991794, Length=396, Percent_Identity=34.3434343434343, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17560276, Length=394, Percent_Identity=33.502538071066, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI25146537, Length=199, Percent_Identity=33.6683417085427, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI45552519, Length=405, Percent_Identity=37.5308641975309, Blast_Score=267, Evalue=1e-71,
Organism=Drosophila melanogaster, GI45552517, Length=405, Percent_Identity=37.5308641975309, Blast_Score=267, Evalue=1e-71,
Organism=Drosophila melanogaster, GI19921868, Length=405, Percent_Identity=37.5308641975309, Blast_Score=267, Evalue=1e-71,
Organism=Drosophila melanogaster, GI281360430, Length=404, Percent_Identity=34.1584158415842, Blast_Score=228, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 43209; Mature: 43209

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLVSILGIISLFTVAFLFSENRQAIKWRTVLGAFFIQILFAGFILYVPIGRTILNGIS
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVSDIIAYGRVGTEFLFGDLAQYKLGFIFAVNVLPTIVFFSALISVLYYLGIMGWIIKT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGGLHRFLGTTRTESMSATANIFVGSVEAPLVVRPFLAKMSRSELFAVMVGGLASVAGG
HHHHHHHHHCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TMVGYAGLGVELRYLIAASFMSAPAGLMMAKLIVPQTEEIDESTQYEEETPDDAPVNIID
CEEEHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHCCCHHCCCCCCCCCCCCCCEE
AASQGALNGLQIVFAVGASLLAIISLIALLNGGLHKIGILIGFDHLSLDLIFGYLFAPVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEHHHHHHHHHHHHHHHHH
WLIGVPWSESMVAASLIGKKIAINEFVAFADLMTVKDQLSEHSQAIVTFALCGFANLTSI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLMGGLGGIVPSRRPDIARLGMKAIFAATLANLMSATVAGIFLSF
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFLVSILGIISLFTVAFLFSENRQAIKWRTVLGAFFIQILFAGFILYVPIGRTILNGIS
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVSDIIAYGRVGTEFLFGDLAQYKLGFIFAVNVLPTIVFFSALISVLYYLGIMGWIIKT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGGLHRFLGTTRTESMSATANIFVGSVEAPLVVRPFLAKMSRSELFAVMVGGLASVAGG
HHHHHHHHHCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TMVGYAGLGVELRYLIAASFMSAPAGLMMAKLIVPQTEEIDESTQYEEETPDDAPVNIID
CEEEHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHCCCHHCCCCCCCCCCCCCCEE
AASQGALNGLQIVFAVGASLLAIISLIALLNGGLHKIGILIGFDHLSLDLIFGYLFAPVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEHHHHHHHHHHHHHHHHH
WLIGVPWSESMVAASLIGKKIAINEFVAFADLMTVKDQLSEHSQAIVTFALCGFANLTSI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLMGGLGGIVPSRRPDIARLGMKAIFAATLANLMSATVAGIFLSF
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]